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  5. Gb_12172

Gb_12172 (EMB1374, ATSUFE, SUFE1, CPSUFE)


Aliases : EMB1374, ATSUFE, SUFE1, CPSUFE

Description : component SUF-E1 of plastidial SUF system assembly phase


Gene families : OG0002631 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12172
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.24 EMB1374, ATSUFE,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.02 OrthoFinder output from all 47 species
Dac_g00618 EMB1374, ATSUFE,... maturation factor SUF-E1 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Len_g01724 EMB1374, ATSUFE,... maturation factor SUF-E1 of plastidial SUF system... 0.04 OrthoFinder output from all 47 species
Nbi_g07387 EMB1374, ATSUFE,... maturation factor SUF-E1 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Sam_g14233 No alias maturation factor SUF-E1 of plastidial SUF system... 0.05 OrthoFinder output from all 47 species
Spa_g16980 EMB1374, ATSUFE,... maturation factor SUF-E1 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR003808 Fe-S_metab-assoc_dom 90 208
IPR002634 BolA 277 355
No external refs found!