1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_11996

Gb_11996


Description : O-fucosyltransferase 20 OS=Arabidopsis thaliana (sp|o64884|oft20_arath : 674.0)


Gene families : OG0000732 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000732_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_11996
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00204610 evm_27.TU.AmTr_v1... O-fucosyltransferase 20 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00123p00067240 evm_27.TU.AmTr_v1... O-fucosyltransferase 20 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G44500 No alias O-fucosyltransferase family protein 0.05 OrthoFinder output from all 47 species
AT3G07900 No alias O-fucosyltransferase family protein 0.03 OrthoFinder output from all 47 species
Adi_g023166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G034900.1 Ceric.12G034900 not classified & original description: pacid=50601326... 0.03 OrthoFinder output from all 47 species
Dcu_g08917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g24106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21136 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31528 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008502001 No alias O-fucosyltransferase 37 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032027001 No alias O-fucosyltransferase 20 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os04g47520.1 LOC_Os04g47520 O-fucosyltransferase 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g01880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10016710g0010 No alias O-fucosyltransferase 20 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_70931g0030 No alias O-fucosyltransferase 20 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp4g16660.1 No alias O-fucosyltransferase 20 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g20799 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g25227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09642 RHS17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0156.g023649 No alias not classified & original description: CDS=933-1994 0.03 OrthoFinder output from all 47 species
Smo111978 No alias O-fucosyltransferase 20 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo76196 No alias O-fucosyltransferase 20 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g086640.2.1 Solyc01g086640 O-fucosyltransferase 20 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species Als_g18957
Solyc01g112070.4.1 Solyc01g112070 O-fucosyltransferase 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g045420.3.1 Solyc10g045420 O-fucosyltransferase 20 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Tin_g08199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007248_P001 Zm00001e007248 O-fucosyltransferase 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 279 596
No external refs found!