Gb_10203

Description : CTL cellulose microfibrils and hemicellulose interaction protein

Gene families : OG0004024 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004024_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_10203
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
AT1G05850	HOT2, ELP,...	Chitinase family protein	0.07	OrthoFinder output from all 47 species
AT3G16920	CTL2, ATCTL2	chitinase-like protein 2	0.06	OrthoFinder output from all 47 species
Adi_g058657	HOT2, ELP,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g086739	HOT2, ELP,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g11734	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.04	OrthoFinder output from all 47 species
Als_g10357	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Aob_g14857	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Aop_g04697	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.05	OrthoFinder output from all 47 species
Aspi01Gene45047.t1	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.04	OrthoFinder output from all 47 species
Ceric.12G097100.1	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.06	OrthoFinder output from all 47 species
Ceric.34G040100.1	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.08	OrthoFinder output from all 47 species
Dac_g24169	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.02	OrthoFinder output from all 47 species
Dcu_g41169	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.06	OrthoFinder output from all 47 species
GSVIVT01031685001	HOT2, ELP,...	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	OrthoFinder output from all 47 species
GSVIVT01035029001	CTL2, ATCTL2	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.1	OrthoFinder output from all 47 species
LOC_Os08g41100.1	HOT2, ELP,...	CTL cellulose microfibrils and hemicellulose interaction protein	0.07	OrthoFinder output from all 47 species
LOC_Os09g32080.2	HOT2, ELP,...	CTL cellulose microfibrils and hemicellulose interaction protein	0.09	OrthoFinder output from all 47 species
Len_g11945	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.04	OrthoFinder output from all 47 species
Lfl_g08383	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
MA_10435764g0010	HOT2, ELP,...	Chitinase-like protein 1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_726207g0010	HOT2, ELP,...	Chitinase-like protein 1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Mp7g04510.1	HCHIB, B-CHI,...	CTL cellulose microfibrils and hemicellulose interaction protein	0.02	OrthoFinder output from all 47 species
Msp_g08778	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Nbi_g16520	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.07	OrthoFinder output from all 47 species
Ore_g10891	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.05	OrthoFinder output from all 47 species
Pnu_g09632	CTL2, ATCTL2	regulatory protein *(CTL) of cellulose-hemicellulose...	0.04	OrthoFinder output from all 47 species
Ppi_g62066	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Sam_g17794	No alias	regulatory protein *(CTL) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Sam_g26663	No alias	regulatory protein *(CTL) of cellulose-hemicellulose...	0.02	OrthoFinder output from all 47 species
Sam_g36534	No alias	regulatory protein *(CTL) of cellulose-hemicellulose...	0.04	OrthoFinder output from all 47 species
Smo227948	HOT2, ELP,...	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.05	OrthoFinder output from all 47 species
Spa_g25324	HOT2, ELP,...	regulatory protein *(CTL) of cellulose-hemicellulose...	0.07	OrthoFinder output from all 47 species
Zm00001e034566_P001	HOT2, ELP,...	CTL cellulose microfibrils and hemicellulose interaction protein	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	HCCA
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	HCCA
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEP	HCCA
MF	GO:0004478	methionine adenosyltransferase activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
BP	GO:0006555	methionine metabolic process	IEP	HCCA
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
MF	GO:0008172	S-methyltransferase activity	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	HCCA
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009086	methionine biosynthetic process	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	HCCA
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	47	292

External Links

No external refs found!

Gb_10203

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation