1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_09898

Gb_09898


Description : pepsin-type protease


Gene families : OG0001117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001117_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09898

Target Alias Description ECC score Gene Family Method Actions
Aob_g01449 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13881 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02550 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05807 No alias A1-class (Pepsin) protease & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019071001 No alias Protein degradation.peptidase families.aspartic-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01031690001 No alias Protein degradation.peptidase families.aspartic-type... 0.02 OrthoFinder output from all 47 species
Msp_g24609 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00909 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ppi_g05783 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Solyc11g066620.2.1 Solyc11g066620 pepsin-type protease 0.03 OrthoFinder output from all 47 species
Zm00001e022543_P004 Zm00001e022543 pepsin-type protease 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR032799 TAXi_C 292 442
IPR032861 TAXi_N 90 274
No external refs found!