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  5. Gb_08963

Gb_08963 (SLY1)


Aliases : SLY1

Description : SLY-type gibberellin signal transducer. component F-box of SCF E3 ubiquitin ligase complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0001049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08963

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00055630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00114p00120290 evm_27.TU.AmTr_v1... Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT2G27310 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT2G36090 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT3G44326 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT4G24210 SLY1 F-box family protein 0.04 OrthoFinder output from all 47 species
Als_g60927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G080600.1 Ceric.05G080600 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.05 OrthoFinder output from all 47 species
Ehy_g32030 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01011119001 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g33240.1 LOC_Os02g33240 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g05660.1 LOC_Os11g05660 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_146085g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.05 OrthoFinder output from all 47 species
MA_152693g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.05 OrthoFinder output from all 47 species
MA_164016g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.06 OrthoFinder output from all 47 species
MA_196364g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.06 OrthoFinder output from all 47 species
MA_235884g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9868304g0010 SLY1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g047680.3.1 SLY2, Solyc07g047680 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
Zm00001e014737_P001 Zm00001e014737 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e040837_P001 Zm00001e040837 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 14 53
No external refs found!