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  5. Gb_07514

Gb_07514


Description : Pirin-like protein OS=Solanum lycopersicum (sp|q9see4|pirl_sollc : 382.0)


Gene families : OG0002091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002091_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07514

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00186610 evm_27.TU.AmTr_v1... Pirin-like protein OS=Solanum lycopersicum 0.05 OrthoFinder output from all 47 species
AT2G43120 No alias RmlC-like cupins superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G59220 PRN, PRN1, ATPIRIN1 pirin 0.04 OrthoFinder output from all 47 species
Azfi_s0011.g012617 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
Ceric.05G030000.1 Ceric.05G030000 transcriptional co-regulator *(Pirin) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g04607 No alias transcriptional co-regulator *(Pirin) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01031671001 No alias Pirin-like protein OS=Solanum lycopersicum 0.05 OrthoFinder output from all 47 species
LOC_Os03g62790.1 LOC_Os03g62790 Pirin-like protein OS=Solanum lycopersicum... 0.07 OrthoFinder output from all 47 species
Solyc09g098160.3.1 Solyc09g098160 Pirin-like protein OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc09g098180.4.1 Solyc09g098180 Pirin-like protein OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Zm00001e004274_P001 Zm00001e004274 Pirin-like protein OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Zm00001e025778_P001 Zm00001e025778 Pirin-like protein OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008778 Pirin_C_dom 174 279
IPR003829 Pirin_N_dom 28 121
No external refs found!