Gb_07226 (RAP2.12)

Aliases : RAP2.12

Description : transcription factor (ERF)

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_07226

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00268460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AMTR_s00009p00268560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
Adi_g009891	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.04	OrthoFinder output from all 47 species
Adi_g020058	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g022904	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g18800	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cba_g24909	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g46772	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g15134	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
GSVIVT01021146001	ERF-1, ATERF-1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
LOC_Os04g46220.1	ERF-1, ATERF-1,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os08g36920.1	RRTF1, LOC_Os08g36920	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
LOC_Os08g45110.1	LOC_Os08g45110	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_10209922g0010	No alias	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
MA_9068995g0010	No alias	Ethylene-responsive transcription factor ERF016...	0.04	OrthoFinder output from all 47 species
Pp3c3_9430V3.1	ERF2, ATERF2,...	ethylene responsive element binding factor 1	0.01	OrthoFinder output from all 47 species
Spa_g51648	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e006604_P001	ERF7, ATERF7,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e010195_P001	DREB1A, ATCBF3,...	Dehydration-responsive element-binding protein 1A...	0.02	OrthoFinder output from all 47 species
Zm00001e013685_P001	ATERF4, RAP2.5,...	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e015327_P001	Zm00001e015327	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e015946_P001	ERF110, Zm00001e015946	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Zm00001e016064_P001	RAP2.2, Zm00001e016064	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e021579_P001	ERF7, ATERF7,...	Pathogenesis-related genes transcriptional activator...	0.02	OrthoFinder output from all 47 species
Zm00001e034242_P001	RAP2.12, Zm00001e034242	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	223	272

External Links

No external refs found!

Gb_07226 (RAP2.12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation