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  5. Gb_06887

Gb_06887 (FTSH1)


Aliases : FTSH1

Description : component FtsH1|2|5|6|8 of FtsH plastidial protease complexes


Gene families : OG0005126 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06887

Target Alias Description ECC score Gene Family Method Actions
AT5G42270 FTSH5, VAR1 FtsH extracellular protease family 0.08 OrthoFinder output from all 47 species
Adi_g010069 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Aev_g18234 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Ala_g14669 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Aop_g03836 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001361 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Cba_g71747 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Cre12.g485800 FTSH1 Protein degradation.peptidase families.metallopeptidase... 0.02 OrthoFinder output from all 47 species
Dac_g08252 FTSH5, VAR1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Dcu_g12715 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Ehy_g09917 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
LOC_Os06g51029.1 FTSH1, LOC_Os06g51029 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.04 OrthoFinder output from all 47 species
Len_g16157 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Mp3g08790.1 FTSH1 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.05 OrthoFinder output from all 47 species
Msp_g09054 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Nbi_g12160 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Ore_g36173 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Pir_g11763 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Ppi_g16389 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0154.g023581 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Sam_g09587 No alias component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Solyc04g082250.3.1 FTSH5, VAR1,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.05 OrthoFinder output from all 47 species
Zm00001e030153_P001 FTSH1, Zm00001e030153 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 443 485
IPR000642 Peptidase_M41 502 695
IPR003959 ATPase_AAA_core 289 420
No external refs found!