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  5. Gb_06674

Gb_06674


Description : no hits & (original description: none)


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06674

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00251380 evm_27.TU.AmTr_v1... Protein BPS1, chloroplastic OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00040p00052950 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT1G01550 BPS1 Protein of unknown function (DUF793) 0.03 OrthoFinder output from all 47 species
AT1G18740 No alias Protein of unknown function (DUF793) 0.05 OrthoFinder output from all 47 species
AT1G74450 No alias Protein of unknown function (DUF793) 0.03 OrthoFinder output from all 47 species
Adi_g009779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022669 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g024369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g084369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10598 BPS1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24209 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g01778 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g04972 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07595 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54448 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01622 BPS1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g11017 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g07741 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g17662 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17514.t1 Aspi01Gene17514 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18738.t1 Aspi01Gene18738 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58350.t1 Aspi01Gene58350 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G039400.1 Ceric.04G039400 not classified & original description: pacid=50630851... 0.05 OrthoFinder output from all 47 species
Ceric.1Z027800.1 Ceric.1Z027800 not classified & original description: pacid=50597254... 0.05 OrthoFinder output from all 47 species
Ceric.22G029500.1 Ceric.22G029500 not classified & original description: pacid=50614434... 0.04 OrthoFinder output from all 47 species
Ceric.22G029900.1 Ceric.22G029900 not classified & original description: pacid=50615153... 0.02 OrthoFinder output from all 47 species
Ceric.22G030000.1 Ceric.22G030000 not classified & original description: pacid=50614551... 0.04 OrthoFinder output from all 47 species
Ceric.22G030100.1 BPS1, Ceric.22G030100 not classified & original description: pacid=50615453... 0.06 OrthoFinder output from all 47 species
Ceric.22G032100.1 Ceric.22G032100 not classified & original description: pacid=50614987... 0.03 OrthoFinder output from all 47 species
Ceric.25G006500.1 Ceric.25G006500 not classified & original description: pacid=50594057... 0.04 OrthoFinder output from all 47 species
Ceric.27G016500.1 Ceric.27G016500 not classified & original description: pacid=50605586... 0.03 OrthoFinder output from all 47 species
Ceric.31G018000.1 BPS1, Ceric.31G018000 not classified & original description: pacid=50574511... 0.03 OrthoFinder output from all 47 species
Ceric.35G009900.1 Ceric.35G009900 not classified & original description: pacid=50581013... 0.04 OrthoFinder output from all 47 species
Dac_g13361 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02755 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16221 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g22435 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23107 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_18309 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_18312 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g01930.1 ROH1, LOC_Os02g01930 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g06440.1 LOC_Os11g06440 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g11084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06125 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430484g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_123240g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_130577g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_52232g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g11031 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g18667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48320 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g01034 BPS1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g01945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06670 ROH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30449 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g09452 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12102 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g21991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g31153 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013818 No alias not classified & original description: CDS=1-1071 0.03 OrthoFinder output from all 47 species
Solyc01g094950.3.1 Solyc01g094950 Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc04g071480.1.1 Solyc04g071480 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Spa_g07215 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g09588 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g18331 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g02494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004370_P001 Zm00001e004370 UPF0496 protein 4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e009073_P001 Zm00001e009073 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e024656_P001 Zm00001e024656 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e041995_P001 Zm00001e041995 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008511 ROH1-like 41 396
No external refs found!