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  5. Gb_04698

Gb_04698 (ATHB3, HB-3, ATHB-3, HAT7)


Aliases : ATHB3, HB-3, ATHB-3, HAT7

Description : transcription factor (HD-ZIP I/II)


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04698
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267430 ATHB1, ATHB-1,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
AMTR_s00078p00085160 ATHB1, ATHB-1,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.03 OrthoFinder output from all 47 species
AT3G01220 ATHB20, HB20 homeobox protein 20 0.04 OrthoFinder output from all 47 species
AT3G01470 ATHB1, ATHB-1,... homeobox 1 0.03 OrthoFinder output from all 47 species
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.03 OrthoFinder output from all 47 species
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.04 OrthoFinder output from all 47 species
AT5G15150 ATHB3, HB-3, ATHB-3, HAT7 homeobox 3 0.03 OrthoFinder output from all 47 species
AT5G53980 ATHB52, HB52 homeobox protein 52 0.06 OrthoFinder output from all 47 species
AT5G66700 ATHB53, HB53, HB-8 homeobox 53 0.04 OrthoFinder output from all 47 species
Adi_g020723 HB51, ATHB51, LMI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082074 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05113.t1 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.05 OrthoFinder output from all 47 species
Aspi01Gene07957.t1 ATHB13, Aspi01Gene07957 HD-ZIP I/II-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene38379.t1 HB6, ATHB6,... regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56748.t1 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s3184.g114979 No alias not classified & original description: CDS=620-892 0.04 OrthoFinder output from all 47 species
Ceric.07G084400.1 ATHB3, HB-3,... HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.09G061500.1 ATHB3, HB-3,... HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.18G080300.1 ATHB21, HB21,... HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g34453 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g03578 ATHB40, HB40, HB-5 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g07592 HB51, ATHB51, LMI1 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01019012001 ATHB40, HB40, HB-5 RNA biosynthesis.transcriptional activation.HB... 0.07 OrthoFinder output from all 47 species
GSVIVT01020033001 ATHB13 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Gb_20878 ATHB3, HB-3, ATHB-3, HAT7 transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
Gb_35116 AtHB23, HB23 transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
LOC_Os03g07450.1 ATHB13, LOC_Os03g07450 transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
LOC_Os03g10210.1 ATHB40, HB40,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os07g39320.1 ATHB40, HB40,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os08g32080.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
LOC_Os08g32085.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
LOC_Os09g21180.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
LOC_Os09g35910.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os10g23090.1 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os10g26500.1 ATHB13, LOC_Os10g26500 transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
Len_g04607 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
MA_10428916g0010 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
MA_12866g0010 ATHB21, HB21, HB-2 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
MA_130615g0020 HB6, ATHB6 transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
MA_19453g0050 ATHB1, ATHB-1,... Homeobox-leucine zipper protein HAT5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_238039g0010 ATHB13 transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
MA_3951g0010 ATHB13 transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Msp_g05256 HB51, ATHB51, LMI1 HD-ZIP I/II-type transcription factor & original... 0.09 OrthoFinder output from all 47 species
Nbi_g07247 ATHB21, HB21, HB-2 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g32847 ATHB3, HB-3, ATHB-3, HAT7 regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Ore_g32849 ATHB3, HB-3, ATHB-3, HAT7 regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Pnu_g06112 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g07961 ATHB16, HB16, ATHB-16 regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Smo81609 ATHB16, HB16, ATHB-16 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Solyc01g010600.4.1 AtHB23, HB23,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Solyc02g067410.2.1 ATHB3, HB-3,... transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
Solyc03g082550.3.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Solyc04g074700.4.1 ATHB16, HB16,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Solyc06g053220.3.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
Solyc09g008810.3.1 HB51, ATHB51,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Spa_g02959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38872 AtHB23, HB23 HD-ZIP I/II-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g55691 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e000532_P002 ATHB13, Zm00001e000532 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e004824_P001 ATHB3, HB-3,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Zm00001e010218_P001 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e023458_P003 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e035368_P003 ATHB40, HB40,... transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
Zm00001e038901_P001 ATHB13, Zm00001e038901 transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 144 176
IPR001356 Homeobox_dom 87 140
No external refs found!