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  5. Gb_03375

Gb_03375


Description : Chitinase 10 OS=Oryza sativa subsp. japonica (sp|q5nb11|chi10_orysj : 369.0)


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03375

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00243300 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.06 OrthoFinder output from all 47 species
AMTR_s00001p00243570 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum 0.06 OrthoFinder output from all 47 species
AMTR_s00001p00243680 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica 0.05 OrthoFinder output from all 47 species
AMTR_s00001p00243780 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.04 OrthoFinder output from all 47 species
AMTR_s00066p00199730 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT1G02360 No alias Chitinase family protein 0.04 OrthoFinder output from all 47 species
AT2G43570 CHI chitinase, putative 0.05 OrthoFinder output from all 47 species
AT2G43580 No alias Chitinase family protein 0.05 OrthoFinder output from all 47 species
AT2G43610 No alias Chitinase family protein 0.03 OrthoFinder output from all 47 species
AT2G43620 No alias Chitinase family protein 0.06 OrthoFinder output from all 47 species
AT3G47540 No alias Chitinase family protein 0.05 OrthoFinder output from all 47 species
AT4G01700 No alias Chitinase family protein 0.07 OrthoFinder output from all 47 species
Adi_g078268 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06392 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38851 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25708 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36519 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18707 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35678 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32076.t1 ATEP3, EP3,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene32079.t1 ATEP3, EP3,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene32082.t1 ATEP3, EP3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32099.t1 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32113.t1 ATEP3, EP3,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene32150.t1 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65471.t1 ATEP3, EP3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000738 ATEP3, EP3,... not classified & original description: CDS=1-1110 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000746 ATEP3, EP3,... not classified & original description: CDS=491-1327 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000750 ATEP3, EP3,... not classified & original description: CDS=1-942 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000759 No alias not classified & original description: CDS=1-276 0.04 OrthoFinder output from all 47 species
Dcu_g25280 HCHIB, B-CHI,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01004381001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01007190001 HCHIB, B-CHI,... Basic endochitinase OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
GSVIVT01007191001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01038111001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01038116001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01038120001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01038126001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_07463 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Gb_14113 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 297.0) 0.04 OrthoFinder output from all 47 species
Gb_20316 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Gb_20764 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
Gb_20767 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Gb_29992 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Gb_29993 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_34557 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os01g18400.1 LOC_Os01g18400 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os02g39330.1 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os03g04060.1 LOC_Os03g04060 Chitinase 11 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os05g33130.1 HCHIB, B-CHI,... Chitinase 2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os05g33150.1 HCHIB, B-CHI,... Chitinase 7 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os06g51050.1 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os06g51060.1 HCHIB, B-CHI,... Chitinase 1 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os10g39680.1 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os10g39700.1 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g56980 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10099693g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_102538g0010 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 100.0) 0.06 OrthoFinder output from all 47 species
MA_10427514g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_10430424g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10431378g0010 ATEP3, EP3,... Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10431378g0020 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_10435326g0010 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_1327504g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_18470g0020 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 201.0) 0.03 OrthoFinder output from all 47 species
MA_191308g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_295712g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_381956g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_448160g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_4970836g0010 HCHIB, B-CHI,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_530083g0010 HCHIB, B-CHI,... no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_6093228g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_656046g0010 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_741127g0010 No alias Endochitinase At2g43610 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_80085g0010 HCHIB, B-CHI,... Basic endochitinase C OS=Secale cereale... 0.05 OrthoFinder output from all 47 species
MA_8921185g0010 HCHIB, B-CHI,... Basic endochitinase C OS=Secale cereale... 0.06 OrthoFinder output from all 47 species
MA_8960362g0010 HCHIB, B-CHI,... Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 81.6) 0.04 OrthoFinder output from all 47 species
Mp2g21810.1 HCHIB, B-CHI,... Chitinase 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp4g01780.1 HCHIB, B-CHI,... Endochitinase CH5B OS=Phaseolus vulgaris... 0.05 OrthoFinder output from all 47 species
Mp4g20440.1 HCHIB, B-CHI,... Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 235.0) 0.02 OrthoFinder output from all 47 species
Ore_g30042 ATEP3, EP3,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g31117 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32706 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32610 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g00455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo426710 No alias Endochitinase A OS=Zea mays 0.04 OrthoFinder output from all 47 species
Smo446851 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Solyc02g082960.3.1 HCHIB, B-CHI,... Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species
Solyc04g072000.4.1 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc06g053380.3.1 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Solyc07g009510.1.1 HEL, PR4, PR-4,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc10g055800.2.1 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.07 OrthoFinder output from all 47 species
Solyc10g074440.2.1 HCHIB, B-CHI,... Endochitinase OS=Solanum tuberosum (sp|p05315|chit_soltu : 491.0) 0.04 OrthoFinder output from all 47 species
Zm00001e002252_P001 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
Zm00001e027534_P001 Zm00001e027534 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e030152_P001 HCHIB, B-CHI,... Basic endochitinase A OS=Secale cereale... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 35 267
No external refs found!