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  5. Gb_02290

Gb_02290 (HCF173)


Aliases : HCF173

Description : HCF173 protein involved in PS-II assembly


Gene families : OG0006399 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02290

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00232880 HCF173,... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
AT1G16720 HCF173 high chlorophyll fluorescence phenotype 173 0.03 OrthoFinder output from all 47 species
Adi_g026392 HCF173 protein involved in PS-II assembly *(HCF173) & original... 0.03 OrthoFinder output from all 47 species
Ala_g08503 HCF173 protein involved in PS-II assembly *(HCF173) & original... 0.09 OrthoFinder output from all 47 species
Aob_g05244 HCF173 protein involved in PS-II assembly *(HCF173) & original... 0.03 OrthoFinder output from all 47 species
Aop_g05654 HCF173 protein involved in PS-II assembly *(HCF173) & original... 0.02 OrthoFinder output from all 47 species
Cba_g03951 HCF173 protein involved in PS-II assembly *(HCF173) & original... 0.05 OrthoFinder output from all 47 species
Ceric.24G028300.1 HCF173, Ceric.24G028300 protein involved in PS-II assembly *(HCF173) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020830.55 HCF173 No description available 0.02 OrthoFinder output from all 47 species
Cre13.g578650 HCF173 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dac_g00930 HCF173 protein involved in PS-II assembly *(HCF173) & original... 0.04 OrthoFinder output from all 47 species
Dde_g21297 HCF173 protein involved in PS-II assembly *(HCF173) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01029443001 HCF173 Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder output from all 47 species
LOC_Os02g04510.1 HCF173, LOC_Os02g04510 HCF173 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
LOC_Os06g49120.1 HCF173, LOC_Os06g49120 HCF173 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
MA_21385g0010 HCF173 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp3g04800.1 HCF173 HCF173 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Msp_g10500 HCF173 protein involved in PS-II assembly *(HCF173) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g01268 HCF173 protein involved in PS-II assembly *(HCF173) & original... 0.04 OrthoFinder output from all 47 species
Ore_g17922 HCF173 protein involved in PS-II assembly *(HCF173) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g16606 HCF173 protein involved in PS-II assembly *(HCF173) & original... 0.04 OrthoFinder output from all 47 species
Sam_g09334 No alias protein involved in PS-II assembly *(HCF173) & original... 0.04 OrthoFinder output from all 47 species
Solyc08g016080.3.1 HCF173, Solyc08g016080 HCF173 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
Zm00001e013206_P002 HCF173, Zm00001e013206 HCF173 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 151 226
IPR016040 NAD(P)-bd_dom 451 532
IPR013857 NADH-UbQ_OxRdtase-assoc_prot30 292 394
No external refs found!