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  5. Cpa|evm.model.tig00021357.9

Cpa|evm.model.tig00021357.9


No description available


Gene families : OG0002686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002686_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021357.9

Target Alias Description ECC score Gene Family Method Actions
AT1G79090 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.02 OrthoFinder output from all 47 species
AT3G22270 No alias Topoisomerase II-associated protein PAT1 0.01 OrthoFinder output from all 47 species
Adi_g008921 No alias mRNA decay factor *(PAT1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06824 No alias mRNA decay factor *(PAT1) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.08G003100.1 Ceric.08G003100 mRNA decay factor *(PAT1) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.32G051000.1 Ceric.32G051000 mRNA decay factor *(PAT1) & original description:... 0.02 OrthoFinder output from all 47 species
Cre06.g278203 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g04904 No alias mRNA decay factor *(PAT1) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g34445 No alias mRNA decay factor *(PAT1) & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01015721001 No alias Protein PAT1 homolog 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_01548 No alias mRNA decay factor (PAT1) 0.02 OrthoFinder output from all 47 species
Len_g12300 No alias mRNA decay factor *(PAT1) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g09748 No alias mRNA decay factor *(PAT1) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g16038 No alias mRNA decay factor *(PAT1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18304 No alias mRNA decay factor *(PAT1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49700 No alias mRNA decay factor *(PAT1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02293 No alias mRNA decay factor *(PAT1) & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012360 No alias mRNA decay factor *(PAT1) & original description: CDS=162-2273 0.01 OrthoFinder output from all 47 species
Solyc05g016240.4.1 Solyc05g016240 mRNA decay factor (PAT1) 0.02 OrthoFinder output from all 47 species
Solyc12g006420.2.1 Solyc12g006420 mRNA decay factor (PAT1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0097354 prenylation IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA

No InterPro domains available for this sequence

No external refs found!