Cpa|evm.model.tig00021281.10 (EMB2769)

Aliases : EMB2769

Description : Protein degradation.peptidase families.serine-type peptidase activities.Rhomboid protease

Gene families : OG0004019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004019_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021281.10
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
Aob_g13139	EMB2769	component *(CWC15) of MAC spliceosome-associated complex...	0.02	OrthoFinder output from all 47 species
Cre24.g755447	EMB2769	No description available	0.02	OrthoFinder output from all 47 species
Len_g14608	EMB2769	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g06710	EMB2769	component *(CWC15) of MAC spliceosome-associated complex...	0.02	OrthoFinder output from all 47 species
Solyc07g065800.3.1	EMB2769, Solyc07g065800	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Solyc10g005800.3.1	EMB2769, Solyc10g005800	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Zm00001e026065_P002	EMB2769, Zm00001e026065	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	None	Extended
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	None	Extended
BP	GO:0000398	mRNA splicing, via spliceosome	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005681	spliceosomal complex	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022764	Peptidase_S54_rhomboid_dom	360	519
IPR006973	Cwf_Cwc_15	1	228

External Links

No external refs found!