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  5. Cpa|evm.model.tig00021127.121

Cpa|evm.model.tig00021127.121 (FTSH5, VAR1)


Aliases : FTSH5, VAR1

Description : ATP-dependent zinc metalloprotease FTSH 5, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0001722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001722_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021127.121

Target Alias Description ECC score Gene Family Method Actions
AT3G02450 No alias cell division protein ftsH, putative 0.02 OrthoFinder output from all 47 species
Adi_g011418 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g14174 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Aop_g14163 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Cre09.g393950 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.03 OrthoFinder output from all 47 species
GSVIVT01036484001 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.01 OrthoFinder output from all 47 species
MA_10428533g0010 No alias component FtsHi of protein translocation ATPase motor complex 0.02 OrthoFinder output from all 47 species
MA_10436247g0020 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.02 OrthoFinder output from all 47 species
Msp_g02086 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Msp_g07153 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09681 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Pir_g14965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01188 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g17712 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Smo152929 FTSH8 Protein degradation.peptidase families.metallopeptidase... 0.02 OrthoFinder output from all 47 species
Smo98264 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.02 OrthoFinder output from all 47 species
Solyc07g055320.4.1 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 OrthoFinder output from all 47 species
Spa_g04708 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Zm00001e007868_P001 Zm00001e007868 component FtsHi of protein translocation ATPase motor complex 0.01 OrthoFinder output from all 47 species
Zm00001e030358_P003 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.03 OrthoFinder output from all 47 species
Zm00001e037753_P001 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000642 Peptidase_M41 1004 1042
IPR003959 ATPase_AAA_core 790 923
No external refs found!