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  5. Cpa|evm.model.tig00021070.118

Cpa|evm.model.tig00021070.118


Description : Cell cycle.mitosis and meiosis.chromatin condensation.condensin I complex.CAP-D2A component


Gene families : OG0004821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004821_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021070.118
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00018970 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.chromatin... 0.04 OrthoFinder output from all 47 species
AT3G57060 No alias binding 0.06 OrthoFinder output from all 47 species
Aev_g21439 No alias component *(CAP-D2A) of condensin I complex & original... 0.01 OrthoFinder output from all 47 species
Ala_g26011 No alias component *(CAP-D2A) of condensin I complex & original... 0.09 OrthoFinder output from all 47 species
Als_g16422 No alias component *(CAP-D2A) of condensin I complex & original... 0.06 OrthoFinder output from all 47 species
Aop_g66013 No alias component *(CAP-D2A) of condensin I complex & original... 0.08 OrthoFinder output from all 47 species
Aspi01Gene72377.t1 Aspi01Gene72377 component *(CAP-D2A) of condensin I complex & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0250.g060200 No alias component *(CAP-D2A) of condensin I complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.08G005100.1 Ceric.08G005100 component *(CAP-D2A) of condensin I complex & original... 0.08 OrthoFinder output from all 47 species
Cre10.g432500 No alias Cell cycle.mitosis and meiosis.chromatin... 0.04 OrthoFinder output from all 47 species
Dcu_g06519 No alias component *(CAP-D2A) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01033598001 No alias Cell cycle.mitosis and meiosis.chromatin... 0.06 OrthoFinder output from all 47 species
Gb_21478 No alias component CAP-D2A of condensin I complex 0.08 OrthoFinder output from all 47 species
LOC_Os07g46540.1 LOC_Os07g46540 component CAP-D2A of condensin I complex 0.04 OrthoFinder output from all 47 species
Len_g59596 No alias component *(CAP-D2A) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
Lfl_g38611 No alias component *(CAP-D2A) of condensin I complex & original... 0.04 OrthoFinder output from all 47 species
MA_10427588g0010 No alias component CAP-D2A of condensin I complex 0.08 OrthoFinder output from all 47 species
MA_10427588g0020 No alias component CAP-D2A of condensin I complex. serine carboxypeptidase 0.06 OrthoFinder output from all 47 species
Mp3g03650.1 No alias component CAP-D2A of condensin I complex 0.07 OrthoFinder output from all 47 species
Msp_g14231 No alias component *(CAP-D2A) of condensin I complex & original... 0.08 OrthoFinder output from all 47 species
Nbi_g04469 No alias component *(CAP-D2A) of condensin I complex & original... 0.09 OrthoFinder output from all 47 species
Ore_g39423 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g31657 No alias component *(CAP-D2A) of condensin I complex & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002898 No alias component *(CAP-D2A) of condensin I complex & original... 0.02 OrthoFinder output from all 47 species
Spa_g41134 No alias component *(CAP-D2A) of condensin I complex & original... 0.04 OrthoFinder output from all 47 species
Spa_g43429 No alias component *(CAP-D2A) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
Tin_g11231 No alias component *(CAP-D2A) of condensin I complex & original... 0.06 OrthoFinder output from all 47 species
Zm00001e035766_P001 Zm00001e035766 component CAP-D2A of condensin I complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034453 microtubule anchoring IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032682 Cnd1_C 27 187
No external refs found!