Cpa|evm.model.tig00020943.93

No description available

Gene families : OG0002504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002504_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020943.93
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
AT5G20600	No alias	FUNCTIONS IN: molecular_function unknown; INVOLVED IN:...	0.03	OrthoFinder output from all 47 species
Cre01.g019200	No alias	No description available	0.06	OrthoFinder output from all 47 species
Dac_g10546	No alias	rRNA processing factor *(RRP1) & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g16127	No alias	rRNA processing factor *(RRP1) & original description: none	0.01	OrthoFinder output from all 47 species
Gb_07521	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp3g07770.1	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Msp_g26814	No alias	rRNA processing factor *(RRP1) & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g17665	No alias	rRNA processing factor *(RRP1) & original description: none	0.01	OrthoFinder output from all 47 species
Solyc07g017940.1.1	Solyc07g017940	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	IEA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
CC	GO:0030684	preribosome	None	Extended
CC	GO:0030688	preribosome, small subunit precursor	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
CC	GO:0034457	Mpp10 complex	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010301	RRP1	14	118

External Links

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