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Heatmap: Cluster_10 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.68 -0.52 -2.03 -0.0 0.53 0.24 -0.02 0.13 -1.4 -1.53 -0.75 -1.36 -0.49 -0.37 -2.2 -1.07 -0.15 0.56 0.49 -0.18 -2.7 -0.2 2.01 0.18 0.56 0.63
0.72 -0.01 -0.3 -0.04 0.45 0.24 0.49 0.37 0.01 0.02 0.03 0.16 0.73 -1.54 -1.08 -1.58 -0.62 -0.05 -0.33 -0.04 -3.0 -0.32 1.3 -0.25 -0.0 -0.41
0.91 0.26 0.24 0.42 -0.06 -0.44 -0.37 -0.15 -1.1 -1.08 -0.34 -0.02 0.92 -1.14 -1.4 -1.28 -1.07 -0.77 -1.04 -0.97 0.39 -1.35 1.7 0.11 0.86 0.38
-0.03 -0.83 -0.87 0.64 0.36 -0.01 0.19 0.35 -0.41 -0.64 0.17 -0.65 -0.14 -3.26 -2.91 -3.94 -2.95 -1.45 -1.56 -0.79 0.23 -1.01 2.27 0.72 0.81 1.01
0.36 -0.25 -0.26 -0.31 -0.03 -0.09 -0.17 -0.11 -0.23 -0.33 -0.14 0.16 0.17 0.13 -0.01 -0.23 -0.15 0.3 0.26 -0.2 -0.8 -0.82 1.03 0.35 0.04 0.11
0.68 0.33 0.43 0.26 -0.41 -0.81 -0.52 -0.1 -0.49 -0.9 -0.67 -0.46 0.24 -0.48 -0.32 -0.83 -0.44 -0.66 -0.41 -0.21 -0.19 -0.05 1.52 0.08 0.53 0.65
0.67 -0.09 -0.15 -0.21 -0.13 -0.03 -0.26 -0.22 -0.2 -0.25 -0.06 0.15 0.68 -0.55 -0.49 0.13 -0.37 -0.12 -0.32 -0.53 -0.29 0.32 1.07 0.01 0.04 -0.26
0.66 0.02 0.17 0.21 0.06 0.04 0.24 0.42 -0.54 -0.71 -0.61 -0.53 0.51 -1.09 -1.32 -1.52 -1.47 -1.14 -1.15 -0.83 -0.13 -0.62 1.73 0.09 0.85 0.73
0.55 -0.03 0.11 0.26 0.35 0.44 0.21 0.3 -0.1 -0.22 -0.46 -0.09 0.67 -0.9 -1.15 -0.77 -0.52 -0.22 -0.56 -0.57 -1.05 -0.39 1.34 -0.37 0.49 -0.33
0.55 -0.33 -0.4 0.41 0.29 -0.38 0.06 0.34 -0.27 -0.16 -0.17 -0.1 0.48 -1.55 -1.76 -1.25 -0.84 -0.23 -1.36 -1.48 -0.48 -0.52 1.76 0.75 0.94 -0.31
0.53 0.21 -0.22 -0.18 -0.17 -0.04 0.19 0.24 -0.01 -0.24 -0.21 -0.08 0.22 -0.89 -0.72 -0.83 -0.07 0.22 0.28 -0.08 -2.69 -0.73 1.06 0.7 0.24 0.06
0.71 0.34 0.24 0.2 -0.57 -1.59 -1.76 -0.65 -0.74 -0.34 0.27 0.5 0.36 -1.5 -1.59 -1.77 -1.23 -0.98 -1.11 -0.65 0.35 0.53 1.53 0.93 0.61 0.57
0.8 0.58 0.53 0.36 -0.11 -0.59 -0.47 -0.12 -0.43 -0.43 -0.13 0.05 0.35 -0.99 -0.92 -0.61 -1.0 -0.82 -0.88 -0.26 -0.21 -0.04 1.19 0.05 0.66 0.29
0.91 0.2 0.05 0.04 -0.35 -0.45 -0.44 0.01 -0.6 -0.65 -0.52 -0.29 0.86 -0.82 -0.95 -0.73 -0.81 -0.2 -0.51 -0.83 -0.53 0.21 1.85 -0.95 0.58 0.24
0.89 0.5 -0.12 0.1 0.02 0.16 0.1 0.01 -0.4 -0.82 -0.71 -0.4 0.59 -0.45 -0.42 -0.82 -0.64 -0.32 -0.46 -1.13 -0.36 -0.16 1.22 0.31 0.57 -0.12
0.53 -0.36 -1.48 -1.92 -1.61 -1.14 -0.35 0.3 0.19 0.26 0.36 -0.29 0.31 -1.05 -0.67 -0.94 -0.86 0.76 -0.04 -0.7 -3.06 -0.45 1.38 1.33 0.88 0.5
0.64 0.12 -0.83 -0.41 0.12 0.25 0.55 0.46 -0.03 0.43 0.54 0.44 0.73 -0.87 -1.71 -1.66 -1.18 -0.96 -0.86 -1.04 -2.07 -0.17 1.21 -0.08 0.55 0.17
1.56 0.44 -0.77 0.27 0.25 -0.74 -0.25 0.28 -0.37 -0.26 0.38 -0.06 1.24 -1.61 -1.67 -1.89 -1.81 -0.52 -0.71 -1.78 -3.23 -1.67 1.45 0.26 0.58 0.23
0.44 0.28 0.22 0.06 -0.31 -0.47 -0.43 -0.21 -0.38 -0.79 -0.6 -0.03 0.13 -1.4 -1.19 -0.93 -1.05 -0.69 -0.5 -0.48 0.35 0.49 1.67 0.39 0.71 0.41
0.22 -1.37 -2.42 -2.17 -0.91 -0.12 0.54 0.45 0.59 0.35 0.2 -0.08 0.18 -0.51 -0.14 -0.81 -0.29 0.14 0.23 -0.4 -2.2 -0.56 1.39 0.91 0.52 -0.17
0.01 0.21 0.01 -0.0 -0.18 -0.3 0.03 0.05 0.08 -0.03 0.07 0.11 -0.19 -0.24 -0.51 -0.34 -0.36 0.25 0.33 -0.04 -1.0 -0.03 1.16 -0.05 -0.06 -0.22
0.72 -0.05 -0.17 -0.32 -0.49 -0.09 -0.12 0.04 0.3 0.07 0.29 0.3 0.15 -0.7 -0.04 -0.87 -0.55 0.17 0.17 -0.23 -0.22 -1.85 1.01 0.73 -0.25 -0.52
1.25 -0.37 - -0.74 -0.2 -0.11 0.25 0.58 -0.19 -0.72 -0.23 0.21 1.16 -1.96 -2.96 -0.79 - -0.06 -0.21 -1.83 -1.06 -0.67 1.81 -1.5 1.58 0.01
0.4 0.06 -0.13 0.64 0.04 -0.32 -0.5 -0.05 -0.27 -0.17 0.37 0.2 0.46 -1.16 -1.47 -1.13 -1.26 -0.73 -0.9 -0.99 -0.53 -0.66 1.64 0.03 1.0 0.42
0.79 -0.19 -0.87 0.25 0.08 0.38 0.43 0.2 0.15 -0.06 -0.14 -0.03 0.57 -0.64 -1.09 -0.69 -1.04 -0.27 -0.49 -1.25 -2.78 -0.76 1.53 0.3 0.55 -0.19
0.11 0.24 -0.64 -0.16 0.13 0.37 0.3 0.4 -0.11 0.28 -0.04 -0.19 -0.26 -1.29 -0.16 -0.26 -0.54 0.37 0.14 0.09 -1.29 0.14 1.0 -0.28 0.18 -0.55
1.26 -0.41 -1.34 -0.04 -0.42 -0.71 0.18 0.7 -0.07 0.2 0.38 0.02 1.14 -1.78 -1.72 -2.33 -1.9 -0.55 -0.44 -1.25 -2.71 0.37 1.45 0.67 -0.09 0.15
0.97 0.2 -0.19 -0.64 -0.92 -0.55 -0.11 -0.08 0.02 -0.1 -0.01 -0.13 0.8 -0.74 -0.58 -0.89 -0.78 0.15 -0.07 -0.66 -1.7 -0.21 1.71 -0.45 0.5 0.01
0.02 0.12 -0.08 -0.06 0.1 0.27 0.29 0.06 -0.35 -0.42 -0.16 -0.16 -0.35 -0.05 -0.14 0.27 0.01 0.3 0.25 0.19 -1.59 0.33 0.73 -0.34 -0.16 -0.37
1.17 -0.2 -0.77 -0.16 0.19 0.07 0.01 -0.06 -0.26 -0.14 -0.01 -0.1 1.17 -0.57 0.38 -0.76 -1.19 -0.98 -0.73 -1.81 -0.88 -0.3 1.04 -0.32 0.72 0.08
0.48 -0.19 -0.5 -0.32 0.21 0.18 0.42 -0.07 0.14 -0.11 0.15 0.31 0.74 -0.91 -0.52 -0.94 -0.57 0.22 0.27 -0.58 -1.45 -0.06 1.04 0.06 -0.03 -0.45
-0.04 -1.52 -2.46 -1.94 -0.54 0.28 0.61 0.47 0.45 0.16 -0.1 -0.26 -0.19 -0.73 -0.73 -1.16 -0.18 0.42 0.27 -0.26 -1.84 -0.46 1.64 0.86 0.56 -0.03
0.13 0.12 0.23 0.27 -0.1 -0.4 -0.51 -0.4 -0.53 -0.46 -0.1 0.22 -0.05 -0.6 -0.92 -0.8 -0.56 -0.74 -0.66 -0.62 -0.43 0.06 1.52 0.57 0.89 0.56
0.83 -0.27 -0.47 0.61 -0.55 -1.5 -0.71 -0.03 -0.71 -0.51 0.31 -0.14 0.6 -2.02 -1.1 -1.73 -2.04 -1.75 -1.67 -2.28 0.09 -0.07 1.96 0.67 1.28 0.64
0.38 0.09 0.04 -0.02 -0.0 0.09 0.21 -0.12 -0.08 -0.33 -0.25 -0.36 0.04 -0.65 -0.03 -0.67 -0.59 0.32 0.29 -0.42 -1.12 -2.37 1.58 0.37 -0.18 0.2
0.69 0.06 -0.61 -0.48 -0.33 -0.14 0.19 0.15 0.32 0.31 0.21 0.16 0.28 -0.71 -0.56 -0.63 -0.13 0.08 0.07 0.07 -0.96 -1.69 0.98 0.58 0.19 -0.73
1.42 -0.68 -2.14 -3.43 -1.79 0.03 0.19 0.38 0.35 0.46 -0.08 -0.83 0.22 - -3.12 - -1.55 0.07 -0.36 -0.77 -1.43 -1.87 2.21 0.67 0.68 0.98
0.65 -0.16 -0.25 0.08 0.16 0.0 0.47 0.25 -0.05 -0.17 0.16 0.03 0.29 -1.4 -0.92 -1.14 -0.58 -0.08 -0.18 -0.32 -1.29 -0.16 1.47 -0.38 0.53 -0.38
0.55 -1.11 -3.02 -2.96 -2.37 -0.87 0.47 0.45 0.23 0.01 -0.06 -0.15 0.5 -0.5 -0.64 -0.94 -0.24 0.69 0.36 -0.13 -1.45 -1.07 1.54 0.88 0.83 -0.02
0.63 -0.12 -0.31 -0.34 -1.04 -1.13 -0.59 -0.42 -0.86 -0.85 -0.18 0.13 0.62 -0.49 -1.22 -1.01 -0.4 -0.55 -0.66 -0.78 -0.9 0.52 2.18 0.01 0.84 0.46
0.88 -0.55 -1.61 -1.13 -0.31 0.32 0.68 0.49 0.35 0.12 0.03 -0.52 0.57 -0.63 -0.75 -1.03 -0.6 0.01 -0.12 -0.79 -2.55 -1.12 1.52 0.74 0.15 -0.16
1.58 -0.64 -1.15 -0.71 -0.5 -0.68 0.18 0.31 0.2 -0.02 0.17 -0.04 0.89 -3.02 -1.94 -2.33 -1.79 -0.66 -0.75 -1.54 -0.73 -0.58 1.93 0.13 0.97 -0.09
0.67 0.2 -0.53 -0.73 -0.49 -0.28 0.08 0.17 0.07 0.04 -0.16 -0.43 0.17 -0.67 -0.5 -0.67 -0.21 0.42 0.32 -0.14 -1.13 -0.42 1.39 0.19 0.3 -0.21
0.94 -0.59 -1.21 -1.56 -0.92 -0.29 0.31 -0.2 -0.15 0.0 0.09 0.25 0.57 -0.78 -0.33 -0.82 -0.34 0.12 0.19 -0.25 -2.09 0.07 1.28 0.86 0.21 0.11
0.75 -0.86 -1.87 -2.12 -1.94 -0.8 0.03 0.06 -0.41 -0.22 -0.29 0.1 0.18 -0.51 -0.11 -0.91 -0.2 0.62 0.33 0.19 -1.81 -0.37 1.3 1.0 0.92 0.44
0.65 0.09 -0.64 0.1 -0.0 -0.26 0.04 0.17 -0.73 -0.52 -0.58 -0.57 0.7 -1.45 -1.84 -1.52 -1.47 -0.21 -0.47 -1.18 -1.28 -0.66 2.17 0.64 0.84 0.22
0.89 0.81 0.3 0.13 -0.87 -1.24 -0.97 -0.67 -0.68 -0.5 -0.2 0.09 0.12 -1.27 -0.82 -1.32 -0.53 -0.47 -0.12 -0.2 -0.95 -0.05 1.66 1.05 -0.08 0.42
0.63 -0.1 -0.24 -0.12 0.04 0.23 0.38 0.32 -0.11 -0.07 0.03 0.25 0.52 -0.92 -0.62 -0.78 -0.41 0.22 0.07 -0.37 -2.37 -0.03 1.4 -0.83 -0.15 -0.49
0.14 0.42 -0.12 0.0 0.12 0.19 0.15 -0.06 -0.23 -0.27 -0.49 -0.32 -0.31 -1.17 -0.32 -0.47 -0.31 0.36 0.31 -0.23 -1.45 -1.02 1.69 0.18 0.25 -0.36

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.