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  5. Cpa|evm.model.tig00020912.51

Cpa|evm.model.tig00020912.51 (PPAN)


Aliases : PPAN

Description : Peter Pan-like protein OS=Arabidopsis thaliana


Gene families : OG0005695 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005695_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020912.51
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT5G61770 PPAN PETER PAN-like protein 0.07 OrthoFinder output from all 47 species
Als_g06251 PPAN pre-60S ribosomal subunit assembly factor *(SSF1) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene01259.t1 PPAN, Aspi01Gene01259 pre-60S ribosomal subunit assembly factor *(SSF1) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0143.g051458 PPAN pre-60S ribosomal subunit assembly factor *(SSF1) &... 0.02 OrthoFinder output from all 47 species
Ceric.32G047900.1 PPAN, Ceric.32G047900 pre-60S ribosomal subunit assembly factor *(SSF1) &... 0.02 OrthoFinder output from all 47 species
Cre10.g450879 PPAN Peter Pan-like protein OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g03757 PPAN pre-60S ribosomal subunit assembly factor *(SSF1) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01028012001 PPAN Peter Pan-like protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g22350.1 PPAN, LOC_Os03g22350 pre-60S ribosomal subunit assembly factor (SSF1) 0.02 OrthoFinder output from all 47 species
Mp6g06030.1 PPAN pre-60S ribosomal subunit assembly factor (SSF1) 0.06 OrthoFinder output from all 47 species
Sam_g23959 No alias pre-60S ribosomal subunit assembly factor *(SSF1) &... 0.02 OrthoFinder output from all 47 species
Solyc01g096800.3.1 PPAN, Solyc01g096800 pre-60S ribosomal subunit assembly factor (SSF1) 0.03 OrthoFinder output from all 47 species
Zm00001e001623_P001 PPAN, Zm00001e001623 pre-60S ribosomal subunit assembly factor (SSF1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007109 Brix 35 280
No external refs found!