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  5. Cpa|evm.model.tig00001126.4

Cpa|evm.model.tig00001126.4


Description : Chloride channel protein CLC-c OS=Arabidopsis thaliana


Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001126.4

Target Alias Description ECC score Gene Family Method Actions
AT5G33280 No alias Voltage-gated chloride channel family protein 0.03 OrthoFinder output from all 47 species
Adi_g084261 CLC-A, ATCLC-A,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14150 CLC-D, ATCLC-D anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Aop_g18621 CLC-D, ATCLC-D anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Aop_g22484 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene47656.t1 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene51484.t1 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0173.g055773 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Cba_g27347 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.01 OrthoFinder output from all 47 species
Cba_g29223 ATCLC-B, CLC-B not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.01G095400.1 CLC-D, ATCLC-D,... anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Ceric.1Z011500.1 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter *(CLC) &... 0.01 OrthoFinder output from all 47 species
Dde_g34063 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Ehy_g14374 CLC-D, ATCLC-D anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01000264001 ATCLC-C, CLC-C Solute transport.carrier-mediated transport.CLC anion... 0.02 OrthoFinder output from all 47 species
GSVIVT01017933001 CLC-D, ATCLC-D Solute transport.carrier-mediated transport.CLC anion... 0.03 OrthoFinder output from all 47 species
LOC_Os02g35190.1 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter (CLC) 0.03 OrthoFinder output from all 47 species
LOC_Os03g48940.1 CLC-D, ATCLC-D,... anion channel / anion:proton antiporter (CLC) 0.02 OrthoFinder output from all 47 species
Lfl_g09124 CLC-D, ATCLC-D anion channel / anion:proton antiporter *(CLC) &... 0.04 OrthoFinder output from all 47 species
Lfl_g37039 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.01 OrthoFinder output from all 47 species
Msp_g14116 CLC-D, ATCLC-D anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Nbi_g09197 CLC-D, ATCLC-D anion channel / anion:proton antiporter *(CLC) &... 0.01 OrthoFinder output from all 47 species
Nbi_g37480 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Ore_g04555 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.01 OrthoFinder output from all 47 species
Pir_g01369 CLC-D, ATCLC-D anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Ppi_g02314 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010514 CLC-D, ATCLC-D anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Sam_g39701 No alias anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Solyc10g044470.3.1 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter (CLC) 0.02 OrthoFinder output from all 47 species
Spa_g10381 CLC-D, ATCLC-D anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Zm00001e005338_P001 CLC-D, ATCLC-D,... anion channel / anion:proton antiporter (CLC) 0.02 OrthoFinder output from all 47 species
Zm00001e013966_P001 Zm00001e013966 anion channel / anion:proton antiporter (CLC) 0.02 OrthoFinder output from all 47 species
Zm00001e019092_P002 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter (CLC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity IEA Interproscan
BP GO:0006821 chloride transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001807 Cl-channel_volt-gated 73 381
No external refs found!