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  5. Cpa|evm.model.tig00001085.16

Cpa|evm.model.tig00001085.16 (UCH2)


Aliases : UCH2

Description : Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase


Gene families : OG0004976 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004976_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001085.16
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT1G65650 UCH2 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 0.01 OrthoFinder output from all 47 species
Adi_g081262 UCH2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Aev_g03011 UCH2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Ala_g08263 UCH2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aob_g01381 UCH2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Aop_g03434 UCH2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Ceric.22G022000.1 UCH2, Ceric.22G022000 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Gb_38805 UCH2 ubiquitin carboxyl-terminal hydrolase (UCH). ubiquitin... 0.01 OrthoFinder output from all 47 species
Mp4g14320.1 UCH2 ubiquitin carboxyl-terminal hydrolase (UCH). ubiquitin... 0.02 OrthoFinder output from all 47 species
Pir_g04218 UCH2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Sam_g13403 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Sam_g15852 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Zm00001e016258_P005 UCH2, Zm00001e016258 ubiquitin carboxyl-terminal hydrolase (UCH). ubiquitin... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001578 Peptidase_C12_UCH 7 94
No external refs found!