Cpa|evm.model.tig00001085.15

Description : Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP14 component

Gene families : OG0005482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005482_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00001085.15

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00116p00067970	evm_27.TU.AmTr_v1...	Protein translocation.endoplasmic...	0.01	OrthoFinder output from all 47 species
Ala_g00778	No alias	component *(SRP14) of SRP (signal recognition particle)...	0.02	OrthoFinder output from all 47 species
Als_g25681	No alias	component *(SRP14) of SRP (signal recognition particle)...	0.02	OrthoFinder output from all 47 species
Cre01.g031200	No alias	Protein translocation.endoplasmic...	0.01	OrthoFinder output from all 47 species
Dac_g00223	No alias	component *(SRP14) of SRP (signal recognition particle)...	0.02	OrthoFinder output from all 47 species
Gb_20640	No alias	component SRP14 of SRP (signal recognition particle) complex	0.02	OrthoFinder output from all 47 species
LOC_Os04g53220.1	LOC_Os04g53220	component SRP14 of SRP (signal recognition particle) complex	0.01	OrthoFinder output from all 47 species
Pir_g11464	No alias	component *(SRP14) of SRP (signal recognition particle)...	0.02	OrthoFinder output from all 47 species
Pp3c22_3390V3.1	Pp3c22_3390	Signal recognition particle, SRP9/SRP14 subunit	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005048	signal sequence binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEA	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	None	Extended
BP	GO:0006613	cotranslational protein targeting to membrane	None	Extended
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008312	7S RNA binding	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
MF	GO:0030942	endoplasmic reticulum signal peptide binding	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
MF	GO:0033218	amide binding	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
MF	GO:0042277	peptide binding	None	Extended
BP	GO:0045047	protein targeting to ER	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
CC	GO:0048500	signal recognition particle	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070972	protein localization to endoplasmic reticulum	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000149	SNARE binding	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0003714	transcription corepressor activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006334	nucleosome assembly	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0019905	syntaxin binding	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0034728	nucleosome organization	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0051259	protein complex oligomerization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003210	Signal_recog_particle_SRP14	3	94

External Links

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Cpa|evm.model.tig00001085.15

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation