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  5. Cpa|evm.model.tig00001003.32

Cpa|evm.model.tig00001003.32 (AP19)


Aliases : AP19

Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1S small sigma subunit


Gene families : OG0004438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001003.32
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Als_g13578 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.02 OrthoFinder output from all 47 species
Azfi_s0343.g065719 AP19 small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Ceric.15G038200.1 AP19, Ceric.15G038200 small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Cre09.g394100 AP19 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Ehy_g01910 No alias small subunit sigma of AP-3 Golgi to vacuole cargo... 0.02 OrthoFinder output from all 47 species
MA_130401g0010 AP19 small subunit sigma of AP-1 trans-Golgi network cargo... 0.01 OrthoFinder output from all 47 species
Solyc11g005220.2.1 Solyc11g005220 small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Zm00001e005895_P003 AP19, Zm00001e005895 small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 1 137
No external refs found!