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  5. Cpa|evm.model.tig00000944.18

Cpa|evm.model.tig00000944.18


Description : Chromatin organisation.histones.H2B-type histone


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000944.18
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00228620 HTB4,... Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
AMTR_s00085p00145460 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
AT1G07790 HTB1 Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G09480 No alias Histone superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G45980 HTB9, H2B Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G46030 HTB11 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G22880 HTB2, H2B histone B2 0.03 OrthoFinder output from all 47 species
AT5G59910 HTB4 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g019244 No alias histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g021198 No alias histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g021863 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g032961 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068717 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086613 No alias histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g27849 HTB4 histone *(H2B) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g34176 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37348 No alias histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g24674 HTB4 histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g27152 No alias histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g30446 HTB4 histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0019.g015129 HTB4 histone *(H2B) & original description: CDS=1-441 0.02 OrthoFinder output from all 47 species
Cba_g10775 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G054000.1 Ceric.10G054000 histone *(H2B) & original description: pacid=50613612... 0.01 OrthoFinder output from all 47 species
Cre06.g264900 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g276550 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre13.g570050 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g709150 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g710450 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g711750 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g713450 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g714050 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Dde_g19092 HTB4 histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g46434 HTB4 histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01025025001 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Gb_12082 No alias histone (H2B) 0.02 OrthoFinder output from all 47 species
Gb_12096 No alias histone (H2B) 0.03 OrthoFinder output from all 47 species
Gb_26315 HTB11 histone (H2B) 0.01 OrthoFinder output from all 47 species
Gb_32754 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
Gb_41491 No alias histone (H2B) 0.01 OrthoFinder output from all 47 species
LOC_Os01g05630.1 HTB11, LOC_Os01g05630 histone (H2B) 0.01 OrthoFinder output from all 47 species
LOC_Os01g05900.1 HTB11, LOC_Os01g05900 histone (H2B) 0.02 OrthoFinder output from all 47 species
LOC_Os01g06010.1 HTB11, LOC_Os01g06010 histone (H2B) 0.09 OrthoFinder output from all 47 species
LOC_Os05g49860.1 HTB11, LOC_Os05g49860 histone (H2B) 0.01 OrthoFinder output from all 47 species
LOC_Os08g38300.1 HTB11, LOC_Os08g38300 histone (H2B) 0.06 OrthoFinder output from all 47 species
Len_g22924 HTB4 histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Len_g25622 No alias histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Len_g38387 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436516g0020 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_38565g0010 No alias histone (H2B) 0.01 OrthoFinder output from all 47 species
MA_6078786g0010 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_9293473g0010 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
Mp4g13450.1 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
Pir_g14132 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_15750V3.1 HTB4, Pp3c17_15750 Histone superfamily protein 0.03 OrthoFinder output from all 47 species
Ppi_g60088 HTB4 histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g37867 No alias histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g038690.1.1 HTB4, Solyc02g038690 histone (H2B) 0.01 OrthoFinder output from all 47 species
Solyc03g071620.2.1 Solyc03g071620 histone (H2B) 0.01 OrthoFinder output from all 47 species
Solyc05g055440.1.1 HTB11, Solyc05g055440 histone (H2B) 0.02 OrthoFinder output from all 47 species
Solyc06g074790.2.1 HTB11, Solyc06g074790 histone (H2B) 0.01 OrthoFinder output from all 47 species
Solyc06g075800.1.1 HTB11, Solyc06g075800 histone (H2B) 0.04 OrthoFinder output from all 47 species
Solyc11g007920.1.1 HTB11, Solyc11g007920 histone (H2B) 0.03 OrthoFinder output from all 47 species
Solyc11g007930.1.1 HTB11, Solyc11g007930 histone (H2B) 0.01 OrthoFinder output from all 47 species
Solyc11g066430.2.1 Solyc11g066430 histone (H2B) 0.01 OrthoFinder output from all 47 species
Spa_g01863 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10969 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13989 No alias histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g32990 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33212 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g45813 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46015 HTB4 histone *(H2B) & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g46425 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52507 No alias histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g52508 No alias histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05754 No alias histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09273 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13427 HTB4 histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e009857_P001 HTB11, Zm00001e009857 histone (H2B) 0.04 OrthoFinder output from all 47 species
Zm00001e019346_P001 HTB4, Zm00001e019346 histone (H2B) 0.05 OrthoFinder output from all 47 species
Zm00001e020484_P002 HTB1, Zm00001e020484 histone (H2B) 0.03 OrthoFinder output from all 47 species
Zm00001e022201_P001 HTB11, Zm00001e022201 histone (H2B) 0.01 OrthoFinder output from all 47 species
Zm00001e023342_P001 HTB4, Zm00001e023342 histone (H2B) 0.01 OrthoFinder output from all 47 species
Zm00001e027803_P001 HTB11, Zm00001e027803 histone (H2B) 0.01 OrthoFinder output from all 47 species
Zm00001e034226_P001 HTB11, Zm00001e034226 histone (H2B) 0.05 OrthoFinder output from all 47 species
Zm00001e038466_P001 HTB1, Zm00001e038466 histone (H2B) 0.03 OrthoFinder output from all 47 species
Zm00001e039057_P002 HTB11, Zm00001e039057 histone (H2B) 0.04 OrthoFinder output from all 47 species
Zm00001e041296_P001 HTB11, Zm00001e041296 histone (H2B) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 8 105
No external refs found!