Cpa|evm.model.tig00000870.37 (RAD51, ATRAD51)

Aliases : RAD51, ATRAD51

Description : DNA damage response.BRCC DNA-damage response complex.RAD51 component

Gene families : OG0001716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001716_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000870.37
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
Ceric.25G033900.1	ARLIM15, DMC1,...	recombinase *(DMC1) & original description:...	0.01	OrthoFinder output from all 47 species
Dcu_g00814	RAD51, ATRAD51	component *(RAD51) of BRCC regulatory deubiquination...	0.01	OrthoFinder output from all 47 species
Nbi_g04179	RAD51, ATRAD51	component *(RAD51) of BRCC regulatory deubiquination...	0.02	OrthoFinder output from all 47 species
Ore_g32787	RAD51, ATRAD51	component *(RAD51) of BRCC regulatory deubiquination...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000652	ARLIM15, DMC1, ATDMC1	not classified & original description: CDS=1-1248	0.01	OrthoFinder output from all 47 species
Sam_g14921	No alias	component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair...	0.01	OrthoFinder output from all 47 species
Solyc07g017540.4.1	RAD51, ATRAD51,...	component RAD51 of BRCC DNA-damage response complex	0.02	OrthoFinder output from all 47 species
Zm00001e014834_P001	XRCC3, ATXRCC3,...	component XRCC3 of RAD51c-XRCC3 accessory DSB repair heterodimer	0.01	OrthoFinder output from all 47 species
Zm00001e020831_P002	ARLIM15, DMC1,...	recombinase (DMC1)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004252	serine-type endopeptidase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
MF	GO:0030145	manganese ion binding	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0045454	cell redox homeostasis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000209	Peptidase_S8/S53_dom	621	690
IPR000209	Peptidase_S8/S53_dom	716	837
IPR013632	DNA_recomb/repair_Rad51_C	87	357

External Links

No external refs found!