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  5. Cpa|evm.model.tig00000829.17

Cpa|evm.model.tig00000829.17 (ERD2B)


Aliases : ERD2B

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor


Gene families : OG0002105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000829.17
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT3G25040 ERD2B endoplasmic reticulum retention defective 2B 0.02 OrthoFinder output from all 47 species
Adi_g110140 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.01 OrthoFinder output from all 47 species
Ala_g07087 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.01 OrthoFinder output from all 47 species
Cba_g03077 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.01 OrthoFinder output from all 47 species
Ceric.08G005400.1 ERD2B, Ceric.08G005400 COPI trafficking K/HDEL-signature cargo receptor &... 0.01 OrthoFinder output from all 47 species
Dcu_g00909 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.01 OrthoFinder output from all 47 species
Ehy_g08916 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.01 OrthoFinder output from all 47 species
LOC_Os05g45310.1 ERD2, ATERD2,... ERD2 COPI trafficking K/HDEL-signature receptor 0.02 OrthoFinder output from all 47 species
Len_g00374 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.01 OrthoFinder output from all 47 species
Msp_g02326 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.01 OrthoFinder output from all 47 species
Pp3c9_13230V3.1 ERD2B, Pp3c9_13230 endoplasmic reticulum retention defective 2B 0.01 OrthoFinder output from all 47 species
Ppi_g05082 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.02 OrthoFinder output from all 47 species
Zm00001e032183_P001 ERD2, ATERD2,... ERD2 COPI trafficking K/HDEL-signature receptor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006621 protein retention in ER lumen IEA Interproscan
MF GO:0046923 ER retention sequence binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000133 ER_ret_rcpt 28 169
No external refs found!