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  5. Cpa|evm.model.tig00000789.41

Cpa|evm.model.tig00000789.41


Description : ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana


Gene families : OG0007313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000789.41
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00112500 evm_27.TU.AmTr_v1... ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT1G27880 No alias DEAD/DEAH box RNA helicase family protein 0.07 OrthoFinder output from all 47 species
Aop_g25937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54798.t1 Aspi01Gene54798 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0104.g044748 No alias not classified & original description: CDS=162-4085 0.03 OrthoFinder output from all 47 species
Ceric.33G047600.1 Ceric.33G047600 not classified & original description: pacid=50606429... 0.09 OrthoFinder output from all 47 species
Cre15.g634701 No alias ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dac_g29544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g34327 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01010342001 No alias ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os04g40970.1 LOC_Os04g40970 ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Len_g58861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_614726g0010 No alias ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Mp6g05780.1 No alias ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g09957 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo90579 No alias ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc05g014690.3.1 Solyc05g014690 ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g37487 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e041104_P001 Zm00001e041104 ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0006231 dTMP biosynthetic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009129 pyrimidine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009157 deoxyribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009162 deoxyribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009176 pyrimidine deoxyribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009177 pyrimidine deoxyribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009219 pyrimidine deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0019692 deoxyribose phosphate metabolic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0042083 5,10-methylenetetrahydrofolate-dependent methyltransferase activity IEP HCCA
CC GO:0042555 MCM complex IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046073 dTMP metabolic process IEP HCCA
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
MF GO:0050797 thymidylate synthase (FAD) activity IEP HCCA
BP GO:0051095 regulation of helicase activity IEP HCCA
BP GO:0051097 negative regulation of helicase activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1905462 regulation of DNA duplex unwinding IEP HCCA
BP GO:1905463 negative regulation of DNA duplex unwinding IEP HCCA
BP GO:1905774 regulation of DNA helicase activity IEP HCCA
BP GO:1905775 negative regulation of DNA helicase activity IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 645 810
IPR001650 Helicase_C 857 958
No external refs found!