Cpa|evm.model.tig00000718.53


No description available


Gene families : OG0004898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004898_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000718.53

Target Alias Description ECC score Gene Family Method Actions
AT3G10380 ATSEC8, SEC8 subunit of exocyst complex 8 0.02 OrthoFinder output from all 47 species
GSVIVT01016219001 ATSEC8, SEC8 Vesicle trafficking.target membrane tethering.Exocyst... 0.01 OrthoFinder output from all 47 species
Gb_36536 ATSEC8, SEC8 component SEC8 of Exocyst complex 0.02 OrthoFinder output from all 47 species
MA_8816501g0010 ATSEC8, SEC8 Exocyst complex component SEC8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g16690.1 ATSEC8, SEC8 component SEC8 of Exocyst complex 0.02 OrthoFinder output from all 47 species
Pir_g13617 ATSEC8, SEC8 component *(SEC8) of Exocyst complex & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEA Interproscan
BP GO:0006904 vesicle docking involved in exocytosis IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR007191 Sec8_exocyst_N 69 164
No external refs found!