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  5. Cpa|evm.model.tig00000448.26

Cpa|evm.model.tig00000448.26 (ATMYB119, MYB119)


Aliases : ATMYB119, MYB119

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000448.26

Target Alias Description ECC score Gene Family Method Actions
AT5G58850 ATMYB119, MYB119 myb domain protein 119 0.01 OrthoFinder output from all 47 species
Als_g06590 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.01 OrthoFinder output from all 47 species
Aob_g16940 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0125.g048539 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.01 OrthoFinder output from all 47 species
Azfi_s0145.g051658 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original... 0.01 OrthoFinder output from all 47 species
Cba_g25966 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10115 AtMYB117, LOF1, MYB117 MYB class-R2R3 subgroup-21 transcription factor &... 0.01 OrthoFinder output from all 47 species
GSVIVT01011436001 LOF2, MYB105, ATMYB105 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Len_g56915 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002693 MYB56, AtMYB56 not classified & original description: CDS=2737-4053 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 174 220
IPR001005 SANT/Myb 227 266
No external refs found!