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  5. Cpa|evm.model.tig00000388.46

Cpa|evm.model.tig00000388.46 (EDA7)


Aliases : EDA7

No description available


Gene families : OG0004838 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004838_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000388.46

Target Alias Description ECC score Gene Family Method Actions
Aev_g17027 EDA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01171.t1 EDA7, Aspi01Gene01171 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001659 EDA7 not classified & original description: CDS=1-2148 0.03 OrthoFinder output from all 47 species
Ceric.16G023700.1 EDA7, Ceric.16G023700 not classified & original description: pacid=50589882... 0.04 OrthoFinder output from all 47 species
Cre03.g159950 EDA7 No description available 0.12 OrthoFinder output from all 47 species
Dcu_g10961 EDA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033615001 EDA7 No description available 0.01 OrthoFinder output from all 47 species
Gb_40390 EDA7 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g03780.1 EDA7, LOC_Os06g03780 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Lfl_g12766 EDA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_94076g0010 EDA7 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp7g13920.1 EDA7 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Msp_g04517 EDA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09309 EDA7 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g12353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo126756 EDA7 No description available 0.05 OrthoFinder output from all 47 species
Solyc10g085580.3.1 EDA7, Solyc10g085580 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Tin_g10531 EDA7 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e036234_P001 EDA7, Zm00001e036234 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e036633_P001 EDA7, Zm00001e036633 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!