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  5. Cpa|evm.model.tig00000350.30

Cpa|evm.model.tig00000350.30


Description : Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor


Gene families : OG0006739 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000350.30
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Adi_g018318 No alias translation ribosome recycling factor *(RRF) & original... 0.01 OrthoFinder output from all 47 species
Cba_g78306 No alias translation ribosome recycling factor *(RRF) & original... 0.01 OrthoFinder output from all 47 species
Dde_g05763 No alias translation ribosome recycling factor *(RRF) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g17932 No alias translation ribosome recycling factor *(RRF) & original... 0.01 OrthoFinder output from all 47 species
Nbi_g00582 No alias translation ribosome recycling factor *(RRF) & original... 0.01 OrthoFinder output from all 47 species
Pp3c24_18680V3.1 Pp3c24_18680 Ribosome recycling factor 0.01 OrthoFinder output from all 47 species
Solyc11g007740.2.1 Solyc11g007740 RRF translation ribosome recycling factor 0.01 OrthoFinder output from all 47 species
Zm00001e041130_P001 Zm00001e041130 RRF translation ribosome recycling factor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR023584 Ribosome_recyc_fac_dom 105 268
No external refs found!