Sequence Description Alias PCC hrr Cpa|evm.model.tig00000319.24 0.9432364460222653 1 Cpa|evm.model.tig00021319.66 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component THO3, TEX1, AtTEX1 0.9265013564941456 15 Cpa|evm.model.tig00000980.5 0.9213419688315686 10 Cpa|evm.model.tig00021589.12 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 6 NRPE6A, NRPD6A, NRPB6A 0.9208201979559879 4 Cpa|evm.model.tig00000704.50 0.9155664305681597 19 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component PR 65, PP2AA2, PDF1 0.9153676410494371 23 Cpa|evm.model.tig00001003.36 Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.9142787643621859 7 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana RPAC43, ATRPAC43 0.9136810741215723 11 Cpa|evm.model.tig00020614.99 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor QQT2 0.9121173928534491 13 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein ACT11 0.9117333437382017 14 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component SK20, ASK20 0.9116156215368693 17 Cpa|evm.model.tig00021348.86 Translocase of chloroplast 34 OS=Pisum sativum 0.9105874732140554 12 Cpa|evm.model.tig00000037.6 0.9093401128420021 27 Cpa|evm.model.tig00022075.59 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component ATARP2, ARP2, WRM 0.9062474354035068 50 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit 0.9038622583260045 39 Cpa|evm.model.tig00020918.9 0.9032259363106744 24 Cpa|evm.model.tig00020554.27 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.COMPASS histone trimethylation complex.RBL component 0.9030700188373316 17 Cpa|evm.model.tig00000241.28 U2 small nuclear ribonucleoprotein A OS=Arabidopsis thaliana U2A' 0.9023441139993413 18 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana 0.90217125002695 19 Cpa|evm.model.tig00001049.8 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic UDP-glucose pyrophosphorylase UGP2, AtUGP2 0.9018252690155542 20 Cpa|evm.model.tig00000219.44 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIf basal transcription factor complex.beta subunit 0.9009785348870457 21 Cpa|evm.model.tig00000704.40 0.9004767456148689 34 Cpa|evm.model.tig00000692.67 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD1 component PFD1 0.8999855615498012 24 Cpa|evm.model.tig00000042.4 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.8981459056123021 24 Cpa|evm.model.tig00001284.12 Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.transfer phase.HSCB chaperone component 0.8943372227535796 25 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component 0.8942431765658729 42 Cpa|evm.model.tig00000863.20 Protein modification.peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.SEC11 catalytic component 0.8919926710148347 27 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana 0.8902874811155137 55 Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana SMU1 0.8889046533857193 90 Cpa|evm.model.tig00001085.12 0.8878584719028632 32 Cpa|evm.model.tig00021612.34 0.8876557471614759 31 Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica 0.8861709559011197 32 Cpa|evm.model.tig00001093.5 0.8861595347726444 33 Cpa|evm.model.tig00000444.11 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIa basal transcription factor complex.small subunit 0.8843185757624415 34 Cpa|evm.model.tig00001029.17 0.8841607839712484 35 Cpa|evm.model.tig00000704.39 Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana 0.8831852466733277 36 Cpa|evm.model.tig00021464.48 0.8830140201261797 37 Cpa|evm.model.tig00001003.41 0.8828808617958779 38 Cpa|evm.model.tig00000704.47 0.8817453709876091 40 Cpa|evm.model.tig00000217.26 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.NSE4 Kleisin-like bridging component 0.8789561960085251 41 Cpa|evm.model.tig00001234.12 0.8778541577144225 42 Cpa|evm.model.tig00021612.44 0.8772150388634528 83 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease 0.8769523285340369 72 Cpa|evm.model.tig00001085.3 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).NHP2L1/SNU13 snRNP component RFC3, RFC5 0.8769141837888896 45 Cpa|evm.model.tig00020553.148 Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa subsp. japonica 0.8768823033406976 46 Cpa|evm.model.tig00021357.28 Protein modification.phosphorylation.atypical kinase families.RIO kinase 0.8761353457103954 60 Cpa|evm.model.tig00001372.2 0.8760855571125145 48 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 NRPB3, RPB35.5A, RBP36A, NRPD3, NRPE3A 0.8753074011999599 64 Cpa|evm.model.tig00021348.91 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.NBS1 component 0.8750945646076674 50 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis DHS, EDA22 0.8742689670203585 57 Cpa|evm.model.tig00020903.46 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP11 assembly factor UTP11, EDA14 0.8739381805597998 52 Cpa|evm.model.tig00021571.12 Protein modification.N-linked glycosylation.DPMS dolichol-phosphate-mannose synthase complex.DPMS1 catalytic component 0.8736799880763272 53 Cpa|evm.model.tig00000241.31 0.873582859923655 54 Cpa|evm.model.tig00021352.45 Cytoskeleton.cytoskeleton-nucleoskeleton linking.SUN-WIP cytoskeleton-nucleoskeleton-linker complex.Cter-SUN inner nuclear envelope component 0.8728619224598054 55 Cpa|evm.model.tig00000217.22 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.MOS4 component 0.8725616712247315 56 Cpa|evm.model.tig00000615.64 0.8723312559129927 57 Cpa|evm.model.tig00001049.13 0.871737353632037 58 Cpa|evm.model.tig00020903.15 0.8707764047345218 59 Cpa|evm.model.tig00021357.2 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD4 component PFD4, AIP3 0.8707672443323481 73 Cpa|evm.model.tig00001073.12 13 kDa deflagellation-inducible protein OS=Chlamydomonas reinhardtii 0.8707540220936526 61 Cpa|evm.model.tig00000388.34 0.8696281819720423 62 Cpa|evm.model.tig00000194.28 N-alpha-acetyltransferase MAK3 OS=Arabidopsis thaliana ATMAK3 0.8691148557640116 63 Cpa|evm.model.tig00021123.23 0.8689395938050929 64 Cpa|evm.model.tig00020780.62 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD2 component PDF2 0.8689135696459543 76 Cpa|evm.model.tig00021502.1 0.8688274436685282 66 Cpa|evm.model.tig00021464.27 0.8681383892522933 98 Cpa|evm.model.tig00001229.19 0.8670341829863539 69 Cpa|evm.model.tig00021464.54 Synaptonemal complex protein 1 OS=Arabidopsis thaliana 0.8669483914485238 72 Cpa|evm.model.tig00020554.15 0.8663236045404817 72 Cpa|evm.model.tig00020684.31 Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana PPX1, PPX-1 0.8660781178478729 73 Cpa|evm.model.tig00000980.9 Intraflagellar transport protein 25 OS=Chlamydomonas reinhardtii 0.8659335968838258 74 Cpa|evm.model.tig00021319.61 0.8651723964513535 88 Cpa|evm.model.tig00000388.24 0.8648134610404683 77 Cpa|evm.model.tig00022075.51 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP4 component ATGCP4, GCP4 0.8646027752777979 78 Cpa|evm.model.tig00000194.23 0.8643919515215283 82 Cpa|evm.model.tig00000144.51 Protein modification.disulfide bond formation.endoplasmic reticulum.thiol-disulfide oxidoreductase (ERO) AERO2, ERO2 0.8643026279227949 80 Cpa|evm.model.tig00000241.26 Cell cycle.interphase.DNA replication.initiation.GINS DNA replication fork maintenance complex.PSF3 component 0.8637432798671371 81 Cpa|evm.model.tig00000241.177 0.8632028068249609 82 Cpa|evm.model.tig00020553.157 Protein BTR1 OS=Arabidopsis thaliana 0.8618092932443078 83 Cpa|evm.model.tig00020538.72 0.8614248546894995 84 Cpa|evm.model.tig00000842.34 0.860557060639298 86 Cpa|evm.model.tig00020554.12 0.8598546379578579 87 Cpa|evm.model.tig00020539.41 0.8597042670348025 89 Cpa|evm.model.tig00021612.39 0.8585813455875019 91 Cpa|evm.model.tig00001229.14 Protein degradation.peptide tagging.Ubiquitin-fold-modifier (UFM)-anchor addition.UFM conjugation E2 protein 0.8581286241153587 92 Cpa|evm.model.tig00001372.8 0.8580713460767947 94 Cpa|evm.model.tig00020531.57 Degreening-related gene dee76 protein OS=Auxenochlorella protothecoides 0.8579828518085778 95 Cpa|evm.model.tig00020918.4 0.8579011228409907 96 Cpa|evm.model.tig00000704.34 Elongation factor 2 OS=Arabidopsis thaliana 0.8578820007794641 97 Cpa|evm.model.tig00001424.4 0.857674549814609 99 Cpa|evm.model.tig00000829.17 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor ERD2B 0.8575258528707943 99 Cpa|evm.model.tig00000704.48 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC3 component EMB251, RFC3, EMB161, EMB2775 0.8566198159841371 100