Aliases : SK20, ASK20
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component
Gene families : OG0005505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005505_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cpa|evm.model.tig00000197.16 | |
Cluster | HCCA: Cluster_85 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G61415 | SK21, ASK21 | SKP1-like 21 | 0.01 | OrthoFinder output from all 47 species | |
Aop_g20096 | SK21, ASK21 | ASK-type linker component of SCF E3 ubiquitin ligase... | 0.01 | OrthoFinder output from all 47 species | |
Ceric.06G090100.1 | SK21, ASK21,... | ASK-type linker component of SCF E3 ubiquitin ligase... | 0.01 | OrthoFinder output from all 47 species | |
Ehy_g02294 | SK21, ASK21 | ASK-type linker component of SCF E3 ubiquitin ligase... | 0.01 | OrthoFinder output from all 47 species | |
MA_72198g0010 | SK21, ASK21 | target protein binding component SKP1/ASK1 of... | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e021584_P008 | SK21, ASK21,... | target protein binding component SKP1/ASK1 of... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e040021_P001 | SK21, ASK21,... | target protein binding component SKP1/ASK1 of... | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0008612 | peptidyl-lysine modification to peptidyl-hypusine | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
MF | GO:0050662 | obsolete coenzyme binding | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |