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  5. Cpa|evm.model.tig00000169.7

Cpa|evm.model.tig00000169.7


Description : Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpS adaptor component


Gene families : OG0005952 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005952_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000169.7
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Ala_g00971 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Dac_g12505 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Ehy_g03330 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030163 protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0008616 queuosine biosynthetic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
BP GO:0009163 nucleoside biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042455 ribonucleoside biosynthetic process IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043174 nucleoside salvage IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046116 queuosine metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901659 glycosyl compound biosynthetic process IEP HCCA
BP GO:1990397 queuosine salvage IEP HCCA
InterPro domains Description Start Stop
IPR003769 ClpS_core 101 167
No external refs found!