Cpa|evm.model.tig00000057.67 (ATATH4, ABCA5, ATH4)

Aliases : ATATH4, ABCA5, ATH4

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCA transporter

Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000057.67

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00140160	ATATH6, ATH6,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AT3G47750	ABCA4, ATATH3	ATP binding cassette subfamily A4	0.01	OrthoFinder output from all 47 species
AT3G47780	ATATH6, ATH6	ABC2 homolog 6	0.02	OrthoFinder output from all 47 species
AT5G61700	ATH16, ATATH16	ABC2 homolog 16	0.01	OrthoFinder output from all 47 species
Aev_g01577	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g04431	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.01	OrthoFinder output from all 47 species
Cre14.g618400	ATH7, ATATH7	Solute transport.primary active transport.ABC...	0.06	OrthoFinder output from all 47 species
Cre17.g721000	ATH7, ATATH7	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Dcu_g20095	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01029736001	ATH7, ATATH7	ABC transporter A family member 8 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Gb_37630	ATATH6, ATH6	subfamily ABCA transporter	0.03	OrthoFinder output from all 47 species
Lfl_g05675	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g09165	ATATH6, ATH6	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g34574	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.01	OrthoFinder output from all 47 species
Mp7g18420.1	ATH7, ATATH7	subfamily ABCA transporter	0.03	OrthoFinder output from all 47 species
Msp_g11278	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010130	ATH7, ATATH7	subfamily ABCA transporter & original description: CDS=142-3033	0.01	OrthoFinder output from all 47 species
Sam_g16539	No alias	subfamily ABCA transporter & original description: none	0.01	OrthoFinder output from all 47 species
Smo171117	ATATH6, ATH6	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Smo268954	ATATH6, ATH6	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Solyc03g113040.4.1	ATATH6, ATH6,...	subfamily ABCA transporter	0.01	OrthoFinder output from all 47 species
Solyc06g070950.2.1	ATATH6, ATH6,...	subfamily ABCA transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	605	743

External Links

No external refs found!

Cpa|evm.model.tig00000057.67 (ATATH4, ABCA5, ATH4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation