1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000037.37

Cpa|evm.model.tig00000037.37


Description : Amino acid metabolism.biosynthesis.glutamate family.histidine.imidazoleglycerol-phosphate dehydratase


Gene families : OG0004806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004806_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000037.37
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cre02.g103850 IGPD, HISN5A Amino acid metabolism.biosynthesis.glutamate... 0.03 OrthoFinder output from all 47 species
LOC_Os04g52710.1 IGPD, HISN5A,... imidazoleglycerol-phosphate dehydratase 0.01 OrthoFinder output from all 47 species
Sam_g15232 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEA Interproscan
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000807 ImidazoleglycerolP_deHydtase 100 154
IPR000807 ImidazoleglycerolP_deHydtase 155 201
No external refs found!