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  5. Pnu_g33005

Pnu_g33005 (BGLU44)


Aliases : BGLU44

Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g33005
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00257520 BGLU11,... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AT2G25630 BGLU14 beta glucosidase 14 0.04 OrthoFinder output from all 47 species
Adi_g017832 BGLU43 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g27277 BGLU40 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20087 ATA27, BGLU20 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os10g17650.1 BGLU40, LOC_Os10g17650 Beta-glucosidase 34 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_10436515g0010 BGLU11 Probable inactive beta-glucosidase 33 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_8849054g0010 BGLU40 Beta-glucosidase 24 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Smo98083 BGLU42 Beta-glucosidase 4 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 30 89
IPR001360 Glyco_hydro_1 92 211
No external refs found!