ATMG01360 (COX1)

Aliases : COX1

Description : cytochrome oxidase

Gene families : OG0003734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003734_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ATMG01360

Target	Alias	Description	ECC score	Gene Family Method
Aev_g13913	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.12	OrthoFinder output from all 47 species
Ala_g26228	COX1	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Ala_g39523	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.08	OrthoFinder output from all 47 species
Als_g03025	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.09	OrthoFinder output from all 47 species
Aob_g06478	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.08	OrthoFinder output from all 47 species
Aop_g15521	COX1	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Cba_g25091	COX1	not classified & original description: none	0.13	OrthoFinder output from all 47 species
Ceric.13G041500.1	Ceric.13G041500	not classified & original description: pacid=50636847...	0.06	OrthoFinder output from all 47 species
Ceric.17G026300.1	COX1, Ceric.17G026300	not classified & original description: pacid=50617973...	0.03	OrthoFinder output from all 47 species
Ceric.1Z245600.1	COX1, Ceric.1Z245600	not classified & original description: pacid=50638984...	0.14	OrthoFinder output from all 47 species
Ceric.1Z287000.1	COX1, Ceric.1Z287000	not classified & original description: pacid=50577020...	0.14	OrthoFinder output from all 47 species
Ceric.1Z295800.1	COX1, Ceric.1Z295800	not classified & original description: pacid=50613701...	0.14	OrthoFinder output from all 47 species
Ceric.1Z313900.1	COX1, Ceric.1Z313900	not classified & original description: pacid=50567670...	0.13	OrthoFinder output from all 47 species
Dcu_g47926	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.05	OrthoFinder output from all 47 species
Dde_g08450	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.05	OrthoFinder output from all 47 species
GSVIVT01020676001	COX1	Cytochrome c oxidase subunit 1 OS=Glycine max	0.09	OrthoFinder output from all 47 species
Gb_06295	No alias	Cytochrome c oxidase subunit 1 OS=Raphanus sativus...	0.1	OrthoFinder output from all 47 species
Gb_31333	COX1	component COX1 of cytochrome c oxidase complex	0.13	OrthoFinder output from all 47 species
LOC_Os12g33946.1	COX1, LOC_Os12g33946	component COX1 of cytochrome c oxidase complex	0.13	OrthoFinder output from all 47 species
Len_g25342	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.05	OrthoFinder output from all 47 species
Lfl_g32196	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.08	OrthoFinder output from all 47 species
MA_10428650g0020	COX1	component COX1 of cytochrome c oxidase complex	0.06	OrthoFinder output from all 47 species
Mp3g05480.1	No alias	Cytochrome c oxidase subunit 1 OS=Zea mays...	0.02	OrthoFinder output from all 47 species
Nbi_g21852	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.17	OrthoFinder output from all 47 species
Ore_g07659	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.08	OrthoFinder output from all 47 species
Pir_g02721	COX1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c4_28940V3.1	COX1, Pp3c4_28940	cytochrome oxidase	0.03	OrthoFinder output from all 47 species
Pp3c4_28946V3.1	COX1, Pp3c4_28946	cytochrome oxidase	0.03	OrthoFinder output from all 47 species
Ppi_g59291	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026928	COX1	not classified & original description: CDS=1-180	0.04	OrthoFinder output from all 47 species
Sam_g12101	No alias	EC_1.9 oxidoreductase acting on heme group of donor &...	0.06	OrthoFinder output from all 47 species
Sam_g32352	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g32778	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Sam_g41380	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g41614	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc00g500186.1.1	COX1, Solyc00g500186	component COX1 of cytochrome c oxidase complex	0.17	OrthoFinder output from all 47 species
Solyc00g500250.1.1	COX1, Solyc00g500250	component COX1 of cytochrome c oxidase complex	0.17	OrthoFinder output from all 47 species
Solyc00g500349.1.1	COX1, Solyc00g500349	component COX1 of cytochrome c oxidase complex	0.17	OrthoFinder output from all 47 species
Solyc07g019510.4.1	COX1, Solyc07g019510	component COX1 of cytochrome c oxidase complex	0.12	OrthoFinder output from all 47 species
Solyc08g029290.1.1	Solyc08g029290	Cytochrome c oxidase subunit 1 OS=Sorghum bicolor...	0.03	OrthoFinder output from all 47 species
Solyc11g063610.3.1	COX1, Solyc11g063610	Cytochrome c oxidase subunit 1 OS=Oenothera berteroana...	0.13	OrthoFinder output from all 47 species
Spa_g22204	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.11	OrthoFinder output from all 47 species
Tin_g21821	COX1	EC_1.9 oxidoreductase acTing on heme group of donor &...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004129	cytochrome-c oxidase activity	TAS	Interproscan
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0005751	mitochondrial respiratory chain complex IV	TAS	Interproscan
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
MF	GO:0009055	electron transfer activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0022900	electron transport chain	None	Extended
BP	GO:0022904	respiratory electron transport chain	TAS	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0045277	respiratory chain complex IV	None	Extended
CC	GO:0070069	cytochrome complex	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098798	mitochondrial protein-containing complex	None	Extended
CC	GO:0098800	inner mitochondrial membrane protein complex	None	Extended
CC	GO:0098803	respiratory chain complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
CC	GO:0000315	organellar large ribosomal subunit	IEP	HCCA
MF	GO:0003727	single-stranded RNA binding	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
CC	GO:0005747	mitochondrial respiratory chain complex I	IEP	HCCA
CC	GO:0005753	mitochondrial proton-transporting ATP synthase complex	IEP	HCCA
CC	GO:0005762	mitochondrial large ribosomal subunit	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	HCCA
MF	GO:0008187	poly-pyrimidine tract binding	IEP	HCCA
MF	GO:0008266	poly(U) RNA binding	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
CC	GO:0030964	NADH dehydrogenase complex	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
BP	GO:0042776	proton motive force-driven mitochondrial ATP synthesis	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
CC	GO:0045259	proton-transporting ATP synthase complex	IEP	HCCA
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
CC	GO:0045271	respiratory chain complex I	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0050897	cobalt ion binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
CC	GO:1904949	ATPase complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000883	Cyt_C_Oxase_1	15	461

External Links

No external refs found!

ATMG01360 (COX1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation