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  5. AT5G66600

AT5G66600


Description : Protein of unknown function, DUF547


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G66600

Target Alias Description ECC score Gene Family Method Actions
AT3G12540 No alias Protein of unknown function, DUF547 0.03 OrthoFinder output from all 47 species
Adi_g115515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029449001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g05480.3 LOC_Os01g05480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g55482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013087_P001 Zm00001e013087 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0005046 KDEL sequence binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
CC GO:0008180 COP9 signalosome IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0009956 radial pattern formation IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051457 maintenance of protein location in nucleus IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006869 DUF547 400 534
IPR025757 MIP1_Leuzipper 67 152
No external refs found!