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  5. AT5G66410

AT5G66410 (PLP3b)


Aliases : PLP3b

Description : phosducin-like protein 3 homolog


Gene families : OG0006791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006791_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G66410
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Aob_g03932 PLP3b CCT-interacting tubulin folding cofactor *(PLP3) &... 0.03 OrthoFinder output from all 47 species
Aop_g28139 PLP3b CCT-interacting tubulin folding cofactor *(PLP3) &... 0.03 OrthoFinder output from all 47 species
Cre17.g717750 PLP3b Cytoskeleton.microtubular network.microtubule Tubulin... 0.02 OrthoFinder output from all 47 species
GSVIVT01023465001 PLP3b Cytoskeleton.microtubular network.microtubule Tubulin... 0.05 OrthoFinder output from all 47 species
LOC_Os05g16630.1 PLP3b, LOC_Os05g16630 PLP3 CCT-interacting tubulin folding cofactor 0.04 OrthoFinder output from all 47 species
MA_86745g0010 PLP3a PLP3 CCT-interacting tubulin folding cofactor 0.04 OrthoFinder output from all 47 species
Pp3c17_20760V3.1 PLP3b, Pp3c17_20760 phosducin-like protein 3 homolog 0.04 OrthoFinder output from all 47 species
Zm00001e021208_P001 PLP3b, Zm00001e021208 PLP3 CCT-interacting tubulin folding cofactor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000280 nuclear division IGI Interproscan
BP GO:0000280 nuclear division RCA Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0007000 nucleolus organization IGI Interproscan
BP GO:0007000 nucleolus organization RCA Interproscan
BP GO:0043622 cortical microtubule organization IGI Interproscan
MF GO:0048487 beta-tubulin binding ISS Interproscan
BP GO:0051211 anisotropic cell growth IGI Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
BP GO:0005513 detection of calcium ion IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007349 cellularization IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
CC GO:0009504 cell plate IEP HCCA
BP GO:0009558 embryo sac cellularization IEP HCCA
BP GO:0009593 detection of chemical stimulus IEP HCCA
BP GO:0009612 response to mechanical stimulus IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
BP GO:0010099 regulation of photomorphogenesis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0019722 calcium-mediated signaling IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042780 tRNA 3'-end processing IEP HCCA
MF GO:0042781 3'-tRNA processing endoribonuclease activity IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:2000030 regulation of response to red or far red light IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 89 174
No external refs found!