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Description : RING/U-box superfamily protein
Gene families : OG0025685 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0025685_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G63740 | |
| Cluster | HCCA: Cluster_105 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G08730 | ATARI16, ARI16 | IBR domain-containing protein | 0.09 | OrthoFinder output from all 47 species | |
| AT5G63730 | ARI14, ATARI14 | IBR domain-containing protein | 0.09 | OrthoFinder output from all 47 species | |
| AT5G63750 | ARI13, ATARI13 | RING/U-box superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT5G63760 | ATARI15, ARI15 | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006814 | sodium ion transport | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015081 | sodium ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015385 | sodium:proton antiporter activity | IEP | HCCA |
| MF | GO:0015386 | potassium:proton antiporter activity | IEP | HCCA |
| MF | GO:0022821 | solute:potassium antiporter activity | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| BP | GO:0035725 | sodium ion transmembrane transport | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0051139 | metal cation:proton antiporter activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| MF | GO:0140828 | metal cation:monoatomic cation antiporter activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |