Heatmap: Cluster_105 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
-2.21 -3.45 -1.05 0.5 0.52 -2.03 0.67 - -3.7 -6.27 -4.0 0.45 -1.96 -4.57 - - - - -1.97 -5.2 - - - -0.11 - -1.85 - -3.22 5.28 - -1.98 - -6.77 - -8.98 - - -4.9 - - - - - - - - - -
-3.75 - -3.99 -4.34 -3.36 - -4.23 - -6.65 - - - - -6.29 - -6.34 - - -7.94 -6.97 -5.68 - -5.25 1.07 -4.07 0.26 - -2.12 5.45 -2.59 -3.98 -7.97 -8.73 - - - - -9.85 -8.35 - - - -6.26 - -6.23 - - -
0.24 -8.03 - -1.68 - -1.83 -1.63 - - -6.86 - - - -4.52 - - - - -4.88 -7.02 -2.25 - - 1.89 - 0.48 - -2.4 5.32 - -2.09 -7.94 -2.63 - - - - - - - - - - - -5.42 - - -
- -9.25 -5.54 - - - - - - - - - - - - - - - -4.22 -8.52 - - - 2.48 - 1.28 - -1.46 5.31 - -7.94 - - - - - - - - - - - - - - - - -
AT1G31630 (AGL86)
- - - -1.6 - - -2.14 - - -4.34 - - - - -2.13 - - - - - - - - -0.31 - -1.07 - -4.67 5.52 - - - - -4.41 - - - -5.59 - - - - - - - - - -
- -5.72 - -1.94 - - - - - - - - - - - - - - - - - - - -3.85 - - - - 5.57 - - - -4.17 - -3.96 - - -7.26 - - - - - - - - - -4.01
AT1G34310 (ARF12)
- -2.12 -0.83 -1.02 -3.71 - - - -1.91 - - - - - - -4.26 - - -28.97 -4.39 - - -3.26 1.37 - 0.31 - - 5.4 - -3.01 - -5.51 -5.01 - - - -6.68 -7.29 - - - - - - - - -
AT1G34410 (ARF21)
-5.02 -5.94 - - -2.24 -1.92 - - - - - - - - - - -3.05 - -13.51 - - - - 0.38 - -0.77 - - 5.5 - -4.91 - -20.96 -21.87 -3.3 - - -7.58 - - - - - - -26.19 - - -
AT1G35520 (ARF15)
- -2.02 - -1.07 - - - - -0.74 -3.95 -2.69 - - -4.34 - - - - -4.13 -4.27 - - - 1.6 - -0.21 - - 5.39 - -5.1 - -3.19 -1.32 - - - - - - - - - - - - - -
AT1G49190 (RR19)
- -8.62 -7.5 - - - - - -7.78 - - - -4.95 -7.78 - -8.47 - - -6.86 -10.08 -5.49 - - 0.05 - -0.82 - -2.75 5.53 - -4.93 -7.87 - -9.7 -11.76 -7.45 - -9.8 - - - - - - - - - -
AT1G49810 (NHD2)
- -7.83 - - - - - - - - - - - -0.84 - -4.02 - - -1.32 - - -2.84 - 0.37 - -0.15 - 0.12 5.43 - - -4.92 -4.72 -4.76 -6.6 -3.99 - -2.49 -7.89 - - - - - - - -7.19 -
- -4.71 - -1.48 -1.03 - -0.32 - - - - - - -1.45 - - - - -2.36 -6.94 - - - 0.23 - -1.72 - - 5.3 - 0.15 - - -5.48 -3.41 -0.19 1.39 -4.31 - - - - - - - - - -
-3.26 -0.18 -2.49 1.22 -0.69 -0.0 1.84 -4.92 -3.06 -5.93 -3.95 - -2.16 -1.14 0.75 -0.42 -2.05 -1.85 -1.86 -0.29 -6.4 -0.95 -0.49 0.69 -2.41 0.25 -0.26 1.11 4.41 -4.58 -1.25 -1.25 -0.52 -2.05 -1.03 -2.19 -1.06 -0.28 -1.02 -3.01 - -0.16 -2.45 -4.11 -2.24 - - -4.62
- -6.55 - -0.3 -1.31 - - -1.92 - - - -3.6 - -2.46 - - - - - - - - - 1.31 - -0.25 - - 5.4 - -0.44 - - - - - - -6.34 - - - - - - - - - -
- -3.16 - - - - -4.61 - - - - -6.25 -3.18 -5.5 - -5.08 - - - - - - - 1.01 -27.95 0.3 -3.46 -2.13 5.45 -5.13 -5.11 -3.29 -6.92 -4.61 -9.07 -5.66 - -2.51 -7.63 - - - - - - - - -
0.71 -0.55 - 0.17 -2.31 -1.23 -2.21 - - -2.27 - - - -1.89 - -1.31 - 0.42 -1.39 -1.32 0.03 - -0.25 -1.99 - -2.92 - -1.73 5.18 - -2.22 - -3.9 -2.61 -2.48 -1.85 - -2.29 -1.99 - - - - -1.17 - - -5.04 -
AT1G65640 (DegP4)
- - -1.9 -0.99 -2.75 - - - - - - -4.11 - - - - - - -4.91 - - - - -0.03 - -2.04 - -2.17 5.51 - -3.81 - - - -7.17 - - -7.45 - - - - - - - - - -
-0.93 0.1 -1.97 -1.35 -1.59 -3.12 -1.33 -7.73 -7.09 -6.6 -7.62 - - -1.34 -0.96 -1.98 -4.12 -3.7 -2.96 -0.09 -1.15 -0.81 -1.23 -1.18 -2.41 -1.71 -3.35 -0.63 5.06 -3.53 -1.55 -2.14 -2.21 -3.35 -3.07 -2.46 0.29 -1.79 0.78 -1.48 -2.5 -5.05 -3.71 -0.75 -3.65 -5.31 -6.93 -2.82
AT2G03190 (SK16)
- -6.53 -4.11 - -6.86 - -5.36 - - -7.74 - -6.95 - -3.72 - -7.41 - - -5.13 -7.84 -6.52 - - 1.86 - 0.16 - -3.47 5.41 - -2.11 -8.4 - -5.53 -9.56 -6.4 - -8.6 - - - - - - - - - -
-3.77 - -2.57 -2.28 -2.28 - -3.92 - - - - - -1.6 -5.41 - - - - -3.3 - - - - -0.06 - -1.62 - - 5.5 - -4.3 -4.65 -6.02 -4.44 -5.76 - - -9.04 - - - - - - -3.87 - - -
AT2G20290 (XIG)
0.95 0.14 -0.57 -0.48 -1.77 -4.61 -0.88 -6.17 -6.4 -7.84 -6.1 -3.19 -6.61 -0.6 -0.62 -1.46 -1.84 -1.89 -2.67 -0.14 -1.78 0.08 0.52 0.07 -3.11 -0.43 0.11 0.03 4.36 -4.85 -0.11 -0.8 -1.24 -1.16 -0.35 -0.83 -2.5 -1.31 -3.2 -1.65 -2.73 1.46 0.21 0.22 0.01 -2.72 -1.92 -1.11
AT2G25700 (SK3)
-4.02 -4.51 -0.34 1.51 -0.75 -2.99 0.92 -6.47 -4.09 -5.55 -3.83 -0.73 -0.71 -3.28 -5.47 - - - -1.56 -5.91 -7.89 - -7.53 0.34 - -1.05 - -3.43 5.23 - -1.36 - - -5.07 -9.07 - -7.41 -4.02 -11.12 - - - - - - - -6.74 -
- -0.67 - - -1.91 - - - - - - - - 0.16 - - - - - -3.51 - - -3.73 1.65 - 0.29 - -1.59 5.28 - 1.13 - - - - - - -9.56 - - - - - - - - -7.39 -
-11.0 -9.2 - - - - - - - - - - - -5.73 - -7.32 - - -10.23 -9.8 -8.96 - - 0.53 -8.86 -0.22 - -1.96 5.5 -10.35 -3.94 -9.61 - - -10.31 -7.03 -7.61 -8.79 -10.39 - - - - - - - -10.8 -
0.61 -3.98 -1.08 -2.7 -1.45 - -4.74 - - - - - -4.23 -4.13 - - -2.23 - -2.75 -2.17 -3.51 -4.81 -0.91 1.1 -2.18 0.6 -3.37 1.44 5.13 -1.71 -3.62 -3.7 - - -3.44 -2.79 -1.3 -3.4 -4.24 -0.86 - - -2.3 -2.7 - - - -2.28
AT2G42090 (ACT9)
-8.58 -3.87 -3.5 -3.08 -3.42 -1.57 -4.0 -2.93 - -6.68 - - - -2.73 - -6.34 -3.67 - -4.86 -4.14 - -4.27 -3.07 2.06 -4.43 0.9 -2.09 -2.65 5.28 - -1.94 -5.32 -4.26 -7.35 -7.1 -5.09 -2.63 -3.67 -3.0 - - -3.1 -2.7 -4.42 - -3.67 -10.25 -4.16
-6.45 -8.01 -5.68 -4.43 -7.3 - -5.55 -7.75 -5.22 -7.12 - -7.82 -6.37 -4.72 -2.66 -4.29 -7.28 - -6.13 -5.67 -6.3 -2.93 -4.19 0.02 -2.16 -1.94 - -2.37 5.47 -2.86 -2.4 -3.45 -1.5 -2.01 -5.89 -4.88 - -3.31 -3.55 -6.01 - - - -6.53 - -4.19 -12.36 -6.74
- -9.76 - - - - - - - - - - - -7.39 - - - - - - - - - 1.3 - -0.68 - - 5.49 - -5.55 - - - -9.98 - -6.1 -9.35 - - - - - - - - - -
- - -0.59 1.44 -2.97 - 0.99 - -4.04 - - -4.32 - -5.74 -2.64 - - - -3.33 - - - - -0.66 - -1.47 - -3.59 5.35 - -3.02 - - - - - - -7.09 - - - - - - - - - -
- -11.25 - -8.52 - - - - - - - - - -5.06 - - - - -10.43 -11.53 -8.85 - - 0.49 - -1.56 - -6.37 5.52 - -3.42 -8.58 - -8.38 - -7.49 - -13.06 -10.79 - - -7.49 -5.62 - -4.94 - - -6.74
-6.53 -3.2 -1.62 -1.97 -0.57 0.77 - 1.22 -5.39 0.19 -4.09 -1.97 2.69 -2.12 -0.15 0.1 -2.58 -5.34 0.5 -3.34 -1.43 -2.5 -2.69 -0.54 - -2.06 -4.9 - 4.71 -4.48 -1.59 -2.49 -2.85 -3.11 -2.72 -4.02 - 0.68 -3.73 -4.83 -4.6 -4.03 - -4.35 - - -9.34 -4.06
- -8.45 -3.84 -4.86 - - -5.5 - -6.87 - - - - -4.5 - - - - -5.62 - - - - 0.03 - -1.13 - 0.21 5.49 - -1.86 - - -6.32 - - - -4.8 - - - - - - - - - -
- -8.54 1.83 1.38 2.45 1.95 1.08 -0.19 -2.1 -3.76 -2.3 -1.39 -2.81 -6.29 - -5.59 - - -4.61 - - - - 0.74 - 0.01 - -2.13 4.67 - -3.75 - - - -7.23 - - - - - - - - - - - - -
- - - -4.05 -3.95 - -6.09 - - - - - - -3.9 - - - - -4.53 - -4.42 - -4.7 1.37 - 0.54 - -1.44 5.43 - -3.1 -7.73 -7.79 -7.96 - - -5.9 -6.89 -6.94 - - - - - - - - -
AT3G66656 (AGL91)
-8.06 -6.42 0.74 1.09 1.52 -2.51 0.93 - - -4.9 -4.55 - 2.64 -4.8 - -6.0 - - -2.97 -5.54 - -4.93 - 1.22 - -0.65 - - 4.87 - -2.24 - -4.83 -3.97 -5.56 - - -7.58 - - - - - -4.31 - - - -
-1.18 -2.48 -2.38 0.79 1.86 2.71 2.67 -2.26 -1.03 -4.26 -2.13 -5.86 -2.51 -6.22 -4.18 - -7.33 -4.63 -4.56 -3.46 - -7.43 -8.27 -0.17 - -0.99 - -1.78 4.68 -9.05 -2.67 - -10.11 -9.5 -10.13 - -8.14 -9.02 -12.01 - - -7.26 - - -6.59 - - -
AT4G10670 (GTC2)
- -3.63 0.84 2.06 -0.51 - 1.82 - - - - -3.36 - -4.21 - -3.75 - -3.17 -0.7 -3.45 - - - 2.24 -2.14 0.99 - -0.99 4.83 - -3.6 -3.0 -3.7 - -3.96 - -2.89 -6.22 -5.01 - - - - - -2.62 - -5.29 -
AT4G13380 (MEE56)
-9.18 - -4.85 - - -4.6 -5.76 - - - - - -6.5 - - -5.23 - - - -8.62 - - -5.82 1.09 - 0.14 - -4.1 5.48 - -5.88 - - - - - - -11.65 - - - - - - - - - -
AT4G17160 (RABB1a)
-6.31 -7.45 -5.35 -3.15 -5.24 -2.94 - -3.05 - -4.13 -5.24 - -4.85 -0.77 - -4.14 -5.35 - -5.25 -7.48 -5.5 - - 2.13 -4.48 1.2 - -1.86 5.28 -6.92 -4.27 -6.79 -3.51 - -6.21 -5.15 -4.04 -3.49 -4.67 - - -4.15 -5.06 - - -2.13 -4.01 -
-7.99 -7.12 - -6.72 - - - - -0.29 - 0.56 - - -8.56 - -8.05 - - - -10.4 -5.94 - - -1.09 -2.54 -1.87 -5.81 -3.69 5.46 -2.17 -5.93 -2.53 -4.38 -5.02 - -6.8 -5.98 -8.66 -3.11 -5.77 - - - - - - - -
- - - - - - - -6.81 -6.6 - - -8.01 - -5.43 - - - - -8.21 -9.75 -6.62 - - 0.83 - -0.26 - -2.15 5.49 - -3.67 - - -7.52 - - - -9.66 -8.6 - - - - - - - - -
- -10.44 -6.9 - - - -6.6 -7.24 -7.07 -5.53 -4.55 0.54 -0.8 -6.44 - -5.71 - - -6.35 -8.1 -6.82 - -6.63 1.15 -7.11 0.39 - -1.58 5.39 - -4.08 - - -8.95 -8.88 -6.7 - - - - - - - - -6.6 - - -
-3.78 -9.59 -1.55 - -1.88 -1.55 - -4.43 - -4.53 - -6.89 -2.89 - - - - - -3.34 -9.1 - - -6.21 0.64 -5.69 0.01 - -1.08 5.44 -8.06 -7.26 -4.74 -8.12 -6.16 -10.6 - -6.46 -6.71 - - - - - - - - - -
-1.6 -2.62 -2.06 -0.0 -4.47 -6.04 -1.41 -3.33 -6.7 -4.29 -6.39 - -3.85 -4.59 -3.95 -5.94 - -7.67 0.32 -3.82 -6.59 -7.78 -7.28 0.73 -7.76 -0.64 - -2.14 5.36 -6.77 -2.08 -8.19 -9.19 - -10.09 - -7.52 -9.8 -9.79 - -1.97 -6.35 - -6.68 - - - -
- - - -2.75 - - -4.59 - - - - - - - - - - - -7.83 -8.92 - - - 0.36 - -1.57 - - 5.53 - - - - - - - - - -8.51 - - - - - - - - -
- -2.36 - - - - - - - - -4.22 - - - - - - - -3.27 -3.62 - - - 1.76 -3.06 0.22 -0.58 -3.53 5.39 -5.42 -3.3 - - - - - - - -6.42 - - - - - - - - -
-3.92 0.22 -5.79 -3.62 -4.32 -6.63 -2.8 -8.72 -6.45 -8.6 -5.62 -8.01 -5.88 -1.09 -1.98 -1.7 -0.63 -0.65 -4.41 -1.26 -2.59 -1.9 -2.98 1.05 -7.59 -0.35 -4.88 -2.89 5.2 -8.36 0.68 -3.52 -2.08 -2.74 -2.61 -2.11 -2.31 -3.02 -1.94 - - -4.86 -4.77 -7.5 -6.09 - - -8.27
- - - -2.48 - - - - - - - - - - - - - - - -6.04 - - - 0.68 - -1.27 - - 5.52 - - - - - - - - - -5.72 - - - - - - - - -
-7.02 -5.41 -7.75 -7.74 -6.58 -5.4 - - - - - - - -5.38 -5.05 - - -8.16 -6.48 -3.93 -6.94 - - -0.52 - -2.0 - - 5.54 - -2.79 -9.71 - - -10.45 -7.71 - -11.74 - - - - - - - - -9.73 -
AT5G14960 (DEL2)
1.27 -0.15 -5.9 -4.49 -5.55 -5.66 -3.15 -4.48 -2.2 -6.54 -3.51 -5.86 -7.63 0.09 0.12 -0.85 -3.81 -5.22 -1.55 -0.1 -3.16 0.45 1.25 -0.85 -0.24 -1.37 0.56 0.23 4.35 0.21 -0.34 -0.41 -1.34 -2.35 0.25 -1.41 1.28 -0.08 -2.35 -1.11 -3.2 -2.61 -2.37 -0.27 -0.93 -4.51 -7.2 -0.98
-7.17 -6.12 2.3 2.5 2.33 -0.18 2.06 -4.62 - -5.43 - -4.7 -4.94 - - - - - -0.98 - - - - 0.47 - 0.18 -4.21 -3.97 4.47 - -4.57 -5.08 -6.49 -4.26 - - 0.63 -6.27 -2.28 - - - - - - - - -
- -9.28 - - - - - - - - - - -3.34 -3.95 - - - - - -8.92 - - -5.37 0.14 - -1.14 - -5.33 5.52 - -2.04 - - - - - - -9.03 -9.05 -4.41 - - - - - - - -
-0.95 0.13 -6.06 -3.65 - - -5.82 - - - - - - -6.48 -1.79 -6.98 - -7.32 -3.01 -0.78 -4.75 -5.53 - 1.46 - -0.14 - -2.65 5.32 - 0.49 -7.61 - -6.46 -7.88 - - -7.75 - - - - - - - - - -
-9.22 - -6.01 -3.85 - - - - - -7.16 - -4.66 - -4.77 - - - - -5.83 - - - - 0.45 - -0.29 - -1.53 5.5 - -3.08 - -6.76 -8.05 -9.87 - - -7.43 -9.42 - - - - - - - - -
- -6.69 - - - - - - - - - - - -5.95 - - - - - -5.76 - - - 1.35 - 0.56 -5.25 -4.25 5.45 - -3.26 - - - -9.11 - - -9.61 - - - - - - - - - -
-0.64 -0.57 0.39 -0.05 -0.07 -2.72 0.54 -5.59 -5.0 -5.46 -6.7 -4.87 - -2.89 -3.59 -2.93 -3.62 -4.23 -2.49 -2.63 -5.79 -3.86 -5.0 0.28 -2.25 -0.5 -5.2 -1.61 5.18 -1.7 -1.94 -2.23 -2.69 -1.92 -3.38 -6.65 -4.75 -2.45 -2.61 - - -4.66 -4.58 -2.82 -4.24 -5.23 -5.18 -3.41
- -8.51 - - - - -3.5 - - - - - -3.66 -4.66 - -5.56 - - - - - - - 1.24 - 0.05 - - 5.45 - -0.64 - - - -8.85 - - - - - - - - - - - - -
- -0.87 - - -1.61 - - - - - - - - -2.12 - -3.6 - - -2.41 -3.58 - -2.54 -2.61 1.75 - 0.65 -2.46 0.11 5.11 0.19 -1.83 -3.51 -3.85 -4.84 -1.26 -2.58 -1.61 -1.0 -4.27 - - -0.0 0.08 -1.92 - - - -
AT5G55080 (RAN4)
- -3.16 - - - - - -1.39 - -3.72 - - - -2.38 - -3.24 -2.2 - -1.08 -1.98 -2.35 -1.95 - 1.67 - -0.38 - - 5.17 -2.21 - -3.54 -3.1 -2.66 -1.53 -2.0 - -3.82 -1.15 - - 1.32 - -1.32 -1.91 - -0.18 -3.0
1.25 -4.23 -3.39 -1.12 -3.15 - -1.17 - - - - - - -1.36 -1.98 -2.27 -5.42 - -3.75 -4.26 -5.35 - -5.19 0.45 -3.25 -0.5 1.08 -3.3 5.04 -8.08 -5.33 -2.21 -3.11 -2.46 -2.18 - 0.87 -2.03 -2.28 -6.03 - 1.08 -2.14 - -0.52 - -7.33 -6.34
-2.95 - - -5.92 - - - - - - - - - - - - - - -6.27 - - - - -1.58 - -3.47 - - 5.56 - -8.36 - - - - - - -9.31 - - - - -5.85 - -3.82 - - -
-10.09 -8.73 - -7.66 -8.03 - -7.82 -6.17 -4.07 -3.43 -4.41 0.48 -1.74 -8.66 - -8.72 - - -5.24 -8.53 -8.06 -9.14 -8.72 -3.35 -8.96 -4.49 - -8.58 5.52 -10.48 -9.55 -8.58 -10.76 -7.4 -9.83 -8.69 -7.19 -8.92 -8.81 -4.54 - - -8.62 - -8.61 - -8.35 -8.76

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.