AT5G62520 (SRO5)

Aliases : SRO5

Description : similar to RCD one 5

Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G62520

Target	Alias	Description	ECC score	Gene Family Method
Aob_g26676	AtRCD1, RCD1,...	organellar-signalling mediator *(RCD1) & original...	0.02	OrthoFinder output from all 47 species
Aop_g13070	SRO5	organellar-signalling mediator *(RCD1) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene39617.t1	AtRCD1, RCD1,...	organellar-signalling mediator *(RCD1) & original...	0.03	OrthoFinder output from all 47 species
Cba_g08763	SRO1	organellar-signalling mediator *(RCD1) & original...	0.03	OrthoFinder output from all 47 species
Dde_g17490	SRO1	organellar-signalling mediator *(RCD1) & original...	0.02	OrthoFinder output from all 47 species
Pnu_g25860	AtRCD1, RCD1,...	organellar-signalling mediator *(RCD1) & original...	0.02	OrthoFinder output from all 47 species
Spa_g12730	SRO1	organellar-signalling mediator *(RCD1) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005739	mitochondrion	IDA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010200	response to chitin	RCA	Interproscan
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0072593	reactive oxygen species metabolic process	IMP	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0002252	immune effector process	IEP	HCCA
BP	GO:0002679	respiratory burst involved in defense response	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0034605	cellular response to heat	IEP	HCCA
BP	GO:0045730	respiratory burst	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022003	RST	241	304

External Links

No external refs found!