AT5G61700 (ATH16, ATATH16)


Aliases : ATH16, ATATH16

Description : ABC2 homolog 16


Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G61700

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00140160 ATATH6, ATH6,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AT3G47740 ATATH2, ATH2, ABCA3 ABC2 homolog 2 0.04 OrthoFinder output from all 47 species
Aev_g01577 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04431 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0022.g016229 ATATH6, ATH6 subfamily ABCA transporter & original description: CDS=234-3275 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000057.67 ATATH4, ABCA5, ATH4 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Cre14.g618400 ATH7, ATATH7 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Mp7g18420.1 ATH7, ATATH7 subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Msp_g11278 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g10749 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16539 No alias subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo171117 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo268954 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc06g070920.3.1 ATATH6, ATH6,... subfamily ABCA transporter 0.05 OrthoFinder output from all 47 species
Solyc06g070930.3.1 ATATH6, ATH6,... ABC transporter A family member 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e022343_P002 ATATH6, ATH6,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0009827 plant-type cell wall modification RCA Interproscan
BP GO:0009860 pollen tube growth RCA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
MF GO:0016175 superoxide-generating NAD(P)H oxidase activity IEP HCCA
CC GO:0016324 apical plasma membrane IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030551 cyclic nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
CC GO:0098590 plasma membrane region IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 590 732
No external refs found!