Aliases : ATH16, ATATH16
Description : ABC2 homolog 16
Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00078p00140160 | ATATH6, ATH6,... | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
AT3G47740 | ATATH2, ATH2, ABCA3 | ABC2 homolog 2 | 0.04 | OrthoFinder output from all 47 species | |
Aev_g01577 | ATATH6, ATH6 | subfamily ABCA transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g04431 | ATATH6, ATH6 | subfamily ABCA transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0022.g016229 | ATATH6, ATH6 | subfamily ABCA transporter & original description: CDS=234-3275 | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000057.67 | ATATH4, ABCA5, ATH4 | Solute transport.primary active transport.ABC... | 0.01 | OrthoFinder output from all 47 species | |
Cre14.g618400 | ATH7, ATATH7 | Solute transport.primary active transport.ABC... | 0.01 | OrthoFinder output from all 47 species | |
Mp7g18420.1 | ATH7, ATATH7 | subfamily ABCA transporter | 0.03 | OrthoFinder output from all 47 species | |
Msp_g11278 | ATATH6, ATH6 | subfamily ABCA transporter & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g10749 | ATATH6, ATH6 | subfamily ABCA transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g16539 | No alias | subfamily ABCA transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo171117 | ATATH6, ATH6 | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
Smo268954 | ATATH6, ATH6 | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g070920.3.1 | ATATH6, ATH6,... | subfamily ABCA transporter | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g070930.3.1 | ATATH6, ATH6,... | ABC transporter A family member 3 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e022343_P002 | ATATH6, ATH6,... | subfamily ABCA transporter | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005215 | transporter activity | ISS | Interproscan |
CC | GO:0009507 | chloroplast | ISM | Interproscan |
BP | GO:0009827 | plant-type cell wall modification | RCA | Interproscan |
BP | GO:0009860 | pollen tube growth | RCA | Interproscan |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | HCCA |
MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
BP | GO:0006874 | cellular calcium ion homeostasis | IEP | HCCA |
BP | GO:0006875 | cellular metal ion homeostasis | IEP | HCCA |
MF | GO:0008565 | obsolete protein transporter activity | IEP | HCCA |
BP | GO:0009306 | protein secretion | IEP | HCCA |
BP | GO:0009566 | fertilization | IEP | HCCA |
BP | GO:0009567 | double fertilization forming a zygote and endosperm | IEP | HCCA |
BP | GO:0010208 | pollen wall assembly | IEP | HCCA |
BP | GO:0010584 | pollen exine formation | IEP | HCCA |
BP | GO:0010927 | cellular component assembly involved in morphogenesis | IEP | HCCA |
MF | GO:0016175 | superoxide-generating NAD(P)H oxidase activity | IEP | HCCA |
CC | GO:0016324 | apical plasma membrane | IEP | HCCA |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
MF | GO:0030551 | cyclic nucleotide binding | IEP | HCCA |
MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
BP | GO:0035592 | establishment of protein localization to extracellular region | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
BP | GO:0048868 | pollen tube development | IEP | HCCA |
MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | HCCA |
BP | GO:0055065 | metal ion homeostasis | IEP | HCCA |
BP | GO:0055074 | calcium ion homeostasis | IEP | HCCA |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
BP | GO:0071692 | protein localization to extracellular region | IEP | HCCA |
CC | GO:0098590 | plasma membrane region | IEP | HCCA |
BP | GO:0098771 | inorganic ion homeostasis | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003439 | ABC_transporter-like_ATP-bd | 590 | 732 |
No external refs found! |