AT5G60950 (COBL5)

Aliases : COBL5

Description : COBRA-like protein 5 precursor

Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G60950
Cluster	HCCA: Cluster_43

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00083860	COB,...	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	OrthoFinder output from all 47 species
Aev_g02340	COB	regulatory protein *(COB) of cellulose-hemicellulose...	0.02	OrthoFinder output from all 47 species
Aev_g17419	COB	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Aev_g36598	IRX6, COBL4	regulatory protein *(COB) of cellulose-hemicellulose...	0.05	OrthoFinder output from all 47 species
Ceric.25G025100.1	COBL2, Ceric.25G025100	regulatory protein *(COB) of cellulose-hemicellulose...	0.05	OrthoFinder output from all 47 species
Dac_g00727	COB	regulatory protein *(COB) of cellulose-hemicellulose...	0.04	OrthoFinder output from all 47 species
Ehy_g12791	COB	regulatory protein *(COB) of cellulose-hemicellulose...	0.04	OrthoFinder output from all 47 species
GSVIVT01008128001	COB	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	OrthoFinder output from all 47 species
GSVIVT01012641001	COBL10	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	OrthoFinder output from all 47 species
GSVIVT01036565001	IRX6, COBL4	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	OrthoFinder output from all 47 species
LOC_Os07g49080.1	SEB1, COBL7,...	COB cellulose microfibrils and hemicellulose interaction protein	0.02	OrthoFinder output from all 47 species
MA_10431440g0020	COBL1	COB cellulose microfibrils and hemicellulose interaction protein	0.05	OrthoFinder output from all 47 species
Mp1g17600.1	COBL11	COB cellulose microfibrils and hemicellulose interaction protein	0.06	OrthoFinder output from all 47 species
Ore_g28352	COBL2	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Ore_g34445	COB	regulatory protein *(COB) of cellulose-hemicellulose...	0.04	OrthoFinder output from all 47 species
Solyc09g075540.1.1	SEB1, COBL7,...	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009627	systemic acquired resistance	RCA	Interproscan
BP	GO:0009696	salicylic acid metabolic process	None	Extended
BP	GO:0009697	salicylic acid biosynthetic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0018958	phenol-containing compound metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0042537	benzene-containing compound metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046189	phenol-containing compound biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0050832	defense response to fungus	IEP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002252	immune effector process	IEP	HCCA
BP	GO:0002376	immune system process	IEP	HCCA
BP	GO:0002679	respiratory burst involved in defense response	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004656	procollagen-proline 4-dioxygenase activity	IEP	HCCA
CC	GO:0005768	endosome	IEP	HCCA
CC	GO:0005802	trans-Golgi network	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006857	oligopeptide transport	IEP	HCCA
BP	GO:0006865	amino acid transport	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	HCCA
BP	GO:0009226	nucleotide-sugar biosynthetic process	IEP	HCCA
BP	GO:0009743	response to carbohydrate	IEP	HCCA
BP	GO:0009744	response to sucrose	IEP	HCCA
BP	GO:0009746	response to hexose	IEP	HCCA
BP	GO:0009749	response to glucose	IEP	HCCA
BP	GO:0009750	response to fructose	IEP	HCCA
BP	GO:0010200	response to chitin	IEP	HCCA
BP	GO:0010243	response to organonitrogen compound	IEP	HCCA
BP	GO:0015833	peptide transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
BP	GO:0018126	protein hydroxylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	IEP	HCCA
BP	GO:0019511	peptidyl-proline hydroxylation	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019798	procollagen-proline dioxygenase activity	IEP	HCCA
CC	GO:0031410	cytoplasmic vesicle	IEP	HCCA
MF	GO:0031543	peptidyl-proline dioxygenase activity	IEP	HCCA
MF	GO:0031545	peptidyl-proline 4-dioxygenase activity	IEP	HCCA
CC	GO:0031982	vesicle	IEP	HCCA
CC	GO:0031984	organelle subcompartment	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034284	response to monosaccharide	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0042350	GDP-L-fucose biosynthetic process	IEP	HCCA
BP	GO:0042886	amide transport	IEP	HCCA
BP	GO:0043090	amino acid import	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0045730	respiratory burst	IEP	HCCA
BP	GO:0046368	GDP-L-fucose metabolic process	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0048468	cell development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0048869	cellular developmental process	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0080147	root hair cell development	IEP	HCCA
CC	GO:0097708	intracellular vesicle	IEP	HCCA
CC	GO:0098791	Golgi apparatus subcompartment	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006918	COBRA_pln	46	199

External Links

No external refs found!

AT5G60950 (COBL5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation