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  5. AT5G58003

AT5G58003 (CPL4)


Aliases : CPL4

Description : C-terminal domain phosphatase-like 4


Gene families : OG0001184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G58003

Target Alias Description ECC score Gene Family Method Actions
Ala_g11395 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13479 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g01290 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10621 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0444.g070595 CPL4 subcluster H/CPL3-4 phosphatase & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0580.g078290 CPL4 subcluster H/CPL3-4 phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.181 No alias Protein modification.dephosphorylation.aspartate-based... 0.01 OrthoFinder output from all 47 species
Ehy_g28627 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020250001 CPL4 No description available 0.03 OrthoFinder output from all 47 species
Mp1g07910.1 CPL4 RNA polymerase-II phosphatase. subcluster H/CPL3-4 phosphatase 0.03 OrthoFinder output from all 47 species
Pnu_g19711 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27068 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g005450.3.1 CPL4, Solyc07g005450 RNA polymerase-II phosphatase. subcluster H/CPL3-4 phosphatase 0.03 OrthoFinder output from all 47 species
Zm00001e023696_P002 CPL4, Zm00001e023696 subcluster H/CPL3-4 phosphatase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008022 protein C-terminus binding IPI Interproscan
BP GO:0009651 response to salt stress IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0000741 karyogamy IEP HCCA
CC GO:0000813 ESCRT I complex IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0001709 cell fate determination IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0005046 KDEL sequence binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0016604 nuclear body IEP HCCA
CC GO:0016607 nuclear speck IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0023052 signaling IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001357 BRCT_dom 340 413
IPR004274 FCP1_dom 124 293
No external refs found!