AT5G54510 (DFL1, GH3.6)

Aliases : DFL1, GH3.6

Description : Auxin-responsive GH3 family protein

Gene families : OG0000376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000376_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G54510

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00043p00208540	DFL1, GH3.6,...	Phytohormones.auxin.conjugation and...	0.07	OrthoFinder output from all 47 species
AMTR_s00045p00199760	GH3.9,...	Putative indole-3-acetic acid-amido synthetase GH3.9...	0.06	OrthoFinder output from all 47 species
AT1G48660	No alias	Auxin-responsive GH3 family protein	0.06	OrthoFinder output from all 47 species
AT1G48670	No alias	auxin-responsive GH3 family protein	0.04	OrthoFinder output from all 47 species
AT5G13360	No alias	Auxin-responsive GH3 family protein	0.03	OrthoFinder output from all 47 species
AT5G13380	No alias	Auxin-responsive GH3 family protein	0.04	OrthoFinder output from all 47 species
AT5G51470	No alias	Auxin-responsive GH3 family protein	0.04	OrthoFinder output from all 47 species
Ala_g24399	GH3.5, WES1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g46633	GH3.5, WES1	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene00423.t1	GH3.5, WES1,...	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene00424.t1	GH3.5, WES1,...	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene00425.t1	GH3.5, WES1,...	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene00426.t1	GH3.5, WES1,...	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene06626.t1	GH3.5, WES1,...	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene06627.t1	GH3.5, WES1,...	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene33576.t1	DFL1, GH3.6,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.1Z009000.1	DFL1, GH3.6,...	not classified & original description: pacid=50632766...	0.03	OrthoFinder output from all 47 species
Ceric.26G006600.1	GH3.5, WES1,...	not classified & original description: pacid=50599333...	0.04	OrthoFinder output from all 47 species
Dac_g09979	GH3.17	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g44438	GH3.1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g25677	GH3.5, WES1	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.04	OrthoFinder output from all 47 species
GSVIVT01000176001	GH3.1	Probable indole-3-acetic acid-amido synthetase GH3.1...	0.03	OrthoFinder output from all 47 species
GSVIVT01027971001	GH3.9	Putative indole-3-acetic acid-amido synthetase GH3.9...	0.03	OrthoFinder output from all 47 species
Gb_06148	GH3.17	Indole-3-acetic acid-amido synthetase GH3.17...	0.04	OrthoFinder output from all 47 species
Gb_36596	GH3.17	Indole-3-acetic acid-amido synthetase GH3.17...	0.09	OrthoFinder output from all 47 species
Gb_38023	GH3.5, WES1	Indole-3-acetic acid-amido synthetase GH3.5...	0.03	OrthoFinder output from all 47 species
LOC_Os01g55940.1	GH3.1, LOC_Os01g55940	indole-3-acetic acid-amido synthetase	0.03	OrthoFinder output from all 47 species
LOC_Os11g32510.1	GH3.17, LOC_Os11g32510	Indole-3-acetic acid-amido synthetase GH3.17...	0.05	OrthoFinder output from all 47 species
LOC_Os11g32520.1	GH3.17, LOC_Os11g32520	Probable indole-3-acetic acid-amido synthetase GH3.13...	0.03	OrthoFinder output from all 47 species
Lfl_g06132	DFL1, GH3.6	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.02	OrthoFinder output from all 47 species
MA_10432413g0020	DFL1, GH3.6	Indole-3-acetic acid-amido synthetase GH3.6...	0.03	OrthoFinder output from all 47 species
MA_10434772g0010	DFL1, GH3.6	indole-3-acetic acid-amido synthetase	0.05	OrthoFinder output from all 47 species
Msp_g43816	DFL1, GH3.6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g14022	DFL1, GH3.6	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001444	GH3.5, WES1	not classified & original description: CDS=1-2121	0.04	OrthoFinder output from all 47 species
Solyc02g064830.4.1	GH3.1, Solyc02g064830	indole-3-acetic acid-amido synthetase	0.03	OrthoFinder output from all 47 species
Spa_g06910	GH3.5, WES1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e011159_P002	GH3.17, Zm00001e011159	Indole-3-acetic acid-amido synthetase GH3.17...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISS	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IMP	Interproscan
BP	GO:0009733	response to auxin	ISS	Interproscan
BP	GO:0009733	response to auxin	RCA	Interproscan
BP	GO:0009734	auxin-activated signaling pathway	IMP	Interproscan
BP	GO:0009734	auxin-activated signaling pathway	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009826	unidimensional cell growth	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010252	auxin homeostasis	TAS	Interproscan
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IDA	Interproscan
BP	GO:0010583	response to cyclopentenone	RCA	Interproscan
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0016049	cell growth	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0016881	acid-amino acid ligase activity	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002218	activation of innate immune response	IEP	HCCA
BP	GO:0002252	immune effector process	IEP	HCCA
BP	GO:0002253	activation of immune response	IEP	HCCA
BP	GO:0002684	positive regulation of immune system process	IEP	HCCA
BP	GO:0002833	positive regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009756	carbohydrate mediated signaling	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009838	abscission	IEP	HCCA
BP	GO:0009864	induced systemic resistance, jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	HCCA
BP	GO:0009954	proximal/distal pattern formation	IEP	HCCA
BP	GO:0010016	shoot system morphogenesis	IEP	HCCA
BP	GO:0010022	meristem determinacy	IEP	HCCA
BP	GO:0010182	sugar mediated signaling pathway	IEP	HCCA
BP	GO:0010227	floral organ abscission	IEP	HCCA
BP	GO:0010254	nectary development	IEP	HCCA
BP	GO:0010434	bract formation	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010582	floral meristem determinacy	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031349	positive regulation of defense response	IEP	HCCA
BP	GO:0032103	positive regulation of response to external stimulus	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0040034	regulation of development, heterochronic	IEP	HCCA
MF	GO:0042803	protein homodimerization activity	IEP	HCCA
BP	GO:0045089	positive regulation of innate immune response	IEP	HCCA
MF	GO:0046982	protein heterodimerization activity	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0048439	flower morphogenesis	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048446	petal morphogenesis	IEP	HCCA
BP	GO:0048506	regulation of timing of meristematic phase transition	IEP	HCCA
BP	GO:0048509	regulation of meristem development	IEP	HCCA
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0048584	positive regulation of response to stimulus	IEP	HCCA
BP	GO:0050778	positive regulation of immune response	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0065001	specification of axis polarity	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004993	GH3	28	578

External Links

No external refs found!

AT5G54510 (DFL1, GH3.6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation