AT5G52440 (HCF106)

Aliases : HCF106

Description : Bacterial sec-independent translocation protein mttA/Hcf106

Gene families : OG0005619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005619_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G52440

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene06021.t1	HCF106, Aspi01Gene06021	component *(cpTatB) of thylakoid membrane Tat...	0.02	OrthoFinder output from all 47 species
Ceric.39G008300.1	HCF106, Ceric.39G008300	component *(cpTatB) of thylakoid membrane Tat...	0.02	OrthoFinder output from all 47 species
Cre08.g371650	HCF106	Protein translocation.chloroplast.thylakoid membrane Tat...	0.05	OrthoFinder output from all 47 species
Dde_g06214	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.04	OrthoFinder output from all 47 species
Ehy_g16162	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.03	OrthoFinder output from all 47 species
Msp_g02709	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.04	OrthoFinder output from all 47 species
Nbi_g13630	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.05	OrthoFinder output from all 47 species
Ore_g13537	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.04	OrthoFinder output from all 47 species
Sam_g08783	No alias	component *(cpTatB) of thylakoid membrane Tat...	0.04	OrthoFinder output from all 47 species
Zm00001e008326_P002	HCF106, Zm00001e008326	HCF106 protein involved in PS-II assembly. component...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008320	protein transmembrane transporter activity	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009534	chloroplast thylakoid	IDA	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009668	plastid membrane organization	None	Extended
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
MF	GO:0009977	proton motive force dependent protein transmembrane transporter activity	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010027	thylakoid membrane organization	RCA	Interproscan
BP	GO:0010103	stomatal complex morphogenesis	RCA	Interproscan
BP	GO:0015031	protein transport	None	Extended
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0017038	protein import	None	Extended
CC	GO:0019867	outer membrane	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022884	macromolecule transmembrane transporter activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0031976	plastid thylakoid	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
CC	GO:0033281	TAT protein transport complex	IDA	Interproscan
BP	GO:0033365	protein localization to organelle	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044743	protein transmembrane import into intracellular organelle	None	Extended
BP	GO:0045036	protein targeting to chloroplast	None	Extended
BP	GO:0045038	protein import into chloroplast thylakoid membrane	IDA	Interproscan
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0065002	intracellular protein transmembrane transport	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071806	protein transmembrane transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072596	establishment of protein localization to chloroplast	None	Extended
BP	GO:0072598	protein localization to chloroplast	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
BP	GO:0090626	plant epidermis morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140318	protein transporter activity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006081	cellular aldehyde metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0008654	phospholipid biosynthetic process	IEP	HCCA
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	HCCA
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003369	TatA/B/E	89	139

External Links

No external refs found!

AT5G52440 (HCF106)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation