Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1
Description : CLPC homologue 1
Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00016p00164160 | HSP93-V, DCA1,... | External stimuli response.temperature.Hsp... | 0.06 | OrthoFinder output from all 47 species | |
AMTR_s00065p00179810 | CLPB4, CLPB-M,... | External stimuli response.temperature.Hsp... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00110p00042430 | CLPB3, CLPB-P,... | External stimuli response.temperature.Hsp... | 0.06 | OrthoFinder output from all 47 species | |
Adi_g010878 | CLPB3, CLPB-P, APG6 | organellar chaperone *(Clp-p/Clp-m) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g055207 | SAG15, CLPD, ERD1 | chaperone component *(ClpD) of chloroplast Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g088541 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.05 | OrthoFinder output from all 47 species | |
Aev_g28850 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g11691 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.06 | OrthoFinder output from all 47 species | |
Ala_g12182 | CLPB3, CLPB-P, APG6 | organellar chaperone *(Clp-p/Clp-m) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g16086 | HSP93-V, DCA1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g32977 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g06718 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.06 | OrthoFinder output from all 47 species | |
Aop_g08864 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g11008 | HSP93-V, DCA1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.15G073100.1 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.30G013400.1 | SAG15, CLPD,... | chaperone component *(ClpD) of chloroplast Clp-type... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001416.7 | SAG15, CLPD, ERD1 | No description available | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001416.8 | HSP93-III,... | Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Cre02.g143307 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
Cre43.g760497 | HSP93-V, DCA1,... | Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Dac_g04714 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g24879 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.06 | OrthoFinder output from all 47 species | |
Ehy_g21280 | HSP93-V, DCA1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01008635001 | No alias | No description available | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01008636001 | HSP93-V, DCA1,... | External stimuli response.temperature.Hsp... | 0.07 | OrthoFinder output from all 47 species | |
Gb_20703 | HSP93-V, DCA1,... | chaperone component ClpC of chloroplast Clp-type protease complex | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g32520.1 | SAG15, CLPD,... | chaperone component ClpD of chloroplast Clp-type protease complex | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g32560.1 | HSP93-V, DCA1,... | chaperone component ClpC of chloroplast Clp-type protease complex | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os12g12850.1 | HSP93-V, DCA1,... | chaperone component ClpC of chloroplast Clp-type protease complex | 0.06 | OrthoFinder output from all 47 species | |
Len_g14887 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g04908 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g07411 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.06 | OrthoFinder output from all 47 species | |
MA_1160713g0010 | HSP93-V, DCA1,... | ATP-dependent Clp protease ATP-binding subunit ClpA... | 0.04 | OrthoFinder output from all 47 species | |
MA_596288g0010 | HSP93-V, DCA1,... | Chaperone protein ClpC1, chloroplastic OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
MA_8117g0010 | HSP93-V, DCA1,... | ATP-dependent Clp protease ATP-binding subunit ClpA... | 0.04 | OrthoFinder output from all 47 species | |
Mp1g02560.1 | HSP93-V, DCA1,... | chaperone component ClpC of chloroplast Clp-type protease complex | 0.03 | OrthoFinder output from all 47 species | |
Msp_g05637 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g23938 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.06 | OrthoFinder output from all 47 species | |
Msp_g48913 | CLPB3, CLPB-P, APG6 | organellar chaperone *(Clp-p/Clp-m) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g10414 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g11478 | HSP93-V, DCA1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g13933 | HSP93-V, DCA1,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g29985 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.11 | OrthoFinder output from all 47 species | |
Pir_g11806 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g11817 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g16593 | CLPB3, CLPB-P, APG6 | organellar chaperone *(Clp-p/Clp-m) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g30928 | HSP93-V, DCA1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g23962 | CLPB3, CLPB-P, APG6 | organellar chaperone *(Clp-p/Clp-m) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g03943 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0024.g009060 | CLPB3, CLPB-P, APG6 | organellar chaperone *(Clp-p/Clp-m) & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g14950 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g16601 | No alias | chaperone component *(ClpC) of chloroplast Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g16602 | No alias | chaperone component *(ClpC) of chloroplast Clp-type... | 0.07 | OrthoFinder output from all 47 species | |
Sam_g19448 | No alias | organellar chaperone *(Clp-p/Clp-m) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g36359 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g42976 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g51825 | No alias | chaperone component *(ClpD) of chloroplast Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
Smo439163 | HSP93-V, DCA1,... | External stimuli response.temperature.Hsp... | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g042060.3.1 | HSP93-V, DCA1,... | chaperone component ClpC of chloroplast Clp-type protease complex | 0.13 | OrthoFinder output from all 47 species | |
Spa_g19032 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g46302 | CLPB3, CLPB-P, APG6 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g47608 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g10070 | HSP93-V, DCA1,... | chaperone component *(ClpC) of chloroplast Clp-type... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e008312_P001 | HSP93-V, DCA1,... | chaperone component ClpC of chloroplast Clp-type protease complex | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e014692_P001 | SAG15, CLPD,... | chaperone component ClpD of chloroplast Clp-type protease complex | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e039805_P002 | HSP93-V, DCA1,... | chaperone component ClpC of chloroplast Clp-type protease complex | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e040778_P001 | HSP93-V, DCA1,... | chaperone component ClpC of chloroplast Clp-type protease complex | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004176 | ATP-dependent peptidase activity | IDA | Interproscan |
MF | GO:0005524 | ATP binding | ISS | Interproscan |
CC | GO:0005618 | cell wall | IDA | Interproscan |
CC | GO:0005739 | mitochondrion | IDA | Interproscan |
CC | GO:0009507 | chloroplast | IDA | Interproscan |
CC | GO:0009507 | chloroplast | ISM | Interproscan |
CC | GO:0009532 | plastid stroma | IDA | Interproscan |
CC | GO:0009535 | chloroplast thylakoid membrane | IDA | Interproscan |
CC | GO:0009536 | plastid | IDA | Interproscan |
CC | GO:0009570 | chloroplast stroma | IDA | Interproscan |
BP | GO:0009658 | chloroplast organization | IMP | Interproscan |
CC | GO:0009706 | chloroplast inner membrane | IDA | Interproscan |
BP | GO:0009735 | response to cytokinin | IDA | Interproscan |
BP | GO:0009902 | chloroplast relocation | RCA | Interproscan |
CC | GO:0009941 | chloroplast envelope | IDA | Interproscan |
BP | GO:0010027 | thylakoid membrane organization | RCA | Interproscan |
BP | GO:0010304 | PSII associated light-harvesting complex II catabolic process | RCA | Interproscan |
BP | GO:0010380 | regulation of chlorophyll biosynthetic process | IMP | Interproscan |
MF | GO:0016887 | ATP hydrolysis activity | ISS | Interproscan |
CC | GO:0031897 | Tic complex | TAS | Interproscan |
BP | GO:0034660 | ncRNA metabolic process | RCA | Interproscan |
BP | GO:0042744 | hydrogen peroxide catabolic process | RCA | Interproscan |
BP | GO:0042793 | plastid transcription | RCA | Interproscan |
BP | GO:0045036 | protein targeting to chloroplast | IMP | Interproscan |
BP | GO:0045037 | protein import into chloroplast stroma | IMP | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000304 | response to singlet oxygen | IEP | HCCA |
MF | GO:0003951 | NAD+ kinase activity | IEP | HCCA |
MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | HCCA |
MF | GO:0004331 | fructose-2,6-bisphosphate 2-phosphatase activity | IEP | HCCA |
BP | GO:0006000 | fructose metabolic process | IEP | HCCA |
BP | GO:0006002 | fructose 6-phosphate metabolic process | IEP | HCCA |
BP | GO:0006003 | fructose 2,6-bisphosphate metabolic process | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006873 | cellular monoatomic ion homeostasis | IEP | HCCA |
BP | GO:0006874 | cellular calcium ion homeostasis | IEP | HCCA |
BP | GO:0008219 | cell death | IEP | HCCA |
MF | GO:0008320 | protein transmembrane transporter activity | IEP | HCCA |
CC | GO:0009368 | endopeptidase Clp complex | IEP | HCCA |
CC | GO:0009527 | plastid outer membrane | IEP | HCCA |
CC | GO:0009534 | chloroplast thylakoid | IEP | HCCA |
CC | GO:0009579 | thylakoid | IEP | HCCA |
BP | GO:0009581 | detection of external stimulus | IEP | HCCA |
BP | GO:0009582 | detection of abiotic stimulus | IEP | HCCA |
BP | GO:0009583 | detection of light stimulus | IEP | HCCA |
BP | GO:0009637 | response to blue light | IEP | HCCA |
BP | GO:0009646 | response to absence of light | IEP | HCCA |
CC | GO:0009707 | chloroplast outer membrane | IEP | HCCA |
BP | GO:0009785 | blue light signaling pathway | IEP | HCCA |
CC | GO:0009840 | chloroplastic endopeptidase Clp complex | IEP | HCCA |
MF | GO:0009881 | photoreceptor activity | IEP | HCCA |
MF | GO:0009882 | blue light photoreceptor activity | IEP | HCCA |
BP | GO:0010039 | response to iron ion | IEP | HCCA |
BP | GO:0010109 | regulation of photosynthesis | IEP | HCCA |
BP | GO:0010118 | stomatal movement | IEP | HCCA |
BP | GO:0010155 | regulation of proton transport | IEP | HCCA |
BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
BP | GO:0010343 | singlet oxygen-mediated programmed cell death | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010617 | circadian regulation of calcium ion oscillation | IEP | HCCA |
BP | GO:0012501 | programmed cell death | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015421 | ABC-type oligopeptide transporter activity | IEP | HCCA |
MF | GO:0015440 | ABC-type peptide transporter activity | IEP | HCCA |
MF | GO:0015450 | protein-transporting ATPase activity | IEP | HCCA |
BP | GO:0015996 | chlorophyll catabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
BP | GO:0017038 | protein import | IEP | HCCA |
MF | GO:0019203 | carbohydrate phosphatase activity | IEP | HCCA |
BP | GO:0019220 | regulation of phosphate metabolic process | IEP | HCCA |
BP | GO:0019321 | pentose metabolic process | IEP | HCCA |
BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | HCCA |
BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
MF | GO:0022884 | macromolecule transmembrane transporter activity | IEP | HCCA |
BP | GO:0030003 | cellular monoatomic cation homeostasis | IEP | HCCA |
BP | GO:0030522 | intracellular receptor signaling pathway | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0031399 | regulation of protein modification process | IEP | HCCA |
CC | GO:0031976 | plastid thylakoid | IEP | HCCA |
BP | GO:0032104 | regulation of response to extracellular stimulus | IEP | HCCA |
BP | GO:0032107 | regulation of response to nutrient levels | IEP | HCCA |
BP | GO:0032879 | regulation of localization | IEP | HCCA |
BP | GO:0033015 | tetrapyrrole catabolic process | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034762 | regulation of transmembrane transport | IEP | HCCA |
BP | GO:0034765 | regulation of monoatomic ion transmembrane transport | IEP | HCCA |
BP | GO:0035303 | regulation of dephosphorylation | IEP | HCCA |
BP | GO:0035304 | regulation of protein dephosphorylation | IEP | HCCA |
BP | GO:0035672 | oligopeptide transmembrane transport | IEP | HCCA |
MF | GO:0035673 | oligopeptide transmembrane transporter activity | IEP | HCCA |
BP | GO:0036473 | cell death in response to oxidative stress | IEP | HCCA |
MF | GO:0038023 | signaling receptor activity | IEP | HCCA |
BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
BP | GO:0042592 | homeostatic process | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
BP | GO:0042732 | D-xylose metabolic process | IEP | HCCA |
MF | GO:0042887 | amide transmembrane transporter activity | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043269 | regulation of monoatomic ion transport | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0043609 | regulation of carbon utilization | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0045038 | protein import into chloroplast thylakoid membrane | IEP | HCCA |
BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0046149 | pigment catabolic process | IEP | HCCA |
BP | GO:0046283 | anthocyanin-containing compound metabolic process | IEP | HCCA |
BP | GO:0046777 | protein autophosphorylation | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
BP | GO:0048878 | chemical homeostasis | IEP | HCCA |
MF | GO:0050308 | sugar-phosphatase activity | IEP | HCCA |
BP | GO:0050801 | monoatomic ion homeostasis | IEP | HCCA |
BP | GO:0051049 | regulation of transport | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | HCCA |
BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0051341 | regulation of oxidoreductase activity | IEP | HCCA |
BP | GO:0051353 | positive regulation of oxidoreductase activity | IEP | HCCA |
BP | GO:0051480 | regulation of cytosolic calcium ion concentration | IEP | HCCA |
BP | GO:0055065 | metal ion homeostasis | IEP | HCCA |
BP | GO:0055072 | iron ion homeostasis | IEP | HCCA |
BP | GO:0055074 | calcium ion homeostasis | IEP | HCCA |
BP | GO:0055076 | transition metal ion homeostasis | IEP | HCCA |
BP | GO:0055080 | monoatomic cation homeostasis | IEP | HCCA |
BP | GO:0055082 | cellular chemical homeostasis | IEP | HCCA |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0071483 | cellular response to blue light | IEP | HCCA |
BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090342 | obsolete regulation of cell aging | IEP | HCCA |
BP | GO:0097468 | programmed cell death in response to reactive oxygen species | IEP | HCCA |
BP | GO:0098771 | inorganic ion homeostasis | IEP | HCCA |
MF | GO:0140318 | protein transporter activity | IEP | HCCA |
MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
BP | GO:1902551 | regulation of catalase activity | IEP | HCCA |
BP | GO:1902553 | positive regulation of catalase activity | IEP | HCCA |
BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:1904062 | regulation of monoatomic cation transmembrane transport | IEP | HCCA |
MF | GO:1904680 | peptide transmembrane transporter activity | IEP | HCCA |
BP | GO:2000071 | regulation of defense response by callose deposition | IEP | HCCA |
BP | GO:2000468 | regulation of peroxidase activity | IEP | HCCA |
BP | GO:2000470 | positive regulation of peroxidase activity | IEP | HCCA |
No external refs found! |