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AT5G48770


Description : Disease resistance protein (TIR-NBS-LRR class) family


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G48770
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00250200 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00250780 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
AMTR_s00047p00138210 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.03 OrthoFinder output from all 47 species
AMTR_s00085p00122470 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
AMTR_s00085p00123400 evm_27.TU.AmTr_v1... TMV resistance protein N OS=Nicotiana glutinosa 0.02 OrthoFinder output from all 47 species
AMTR_s01256p00000600 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G27170 No alias transmembrane receptors;ATP binding 0.04 OrthoFinder output from all 47 species
AT4G16957 No alias No description available 0.01 OrthoFinder output from all 47 species
AT5G38340 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
Aspi01Gene60116.t1 Aspi01Gene60116 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_07499 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_123242g0010 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
MA_662972g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Pir_g25659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006952 defense response ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0005388 P-type calcium transporter activity IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006882 cellular zinc ion homeostasis IEP HCCA
BP GO:0009624 response to nematode IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0015085 calcium ion transmembrane transporter activity IEP HCCA
MF GO:0015562 efflux transmembrane transporter activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055069 zinc ion homeostasis IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 13 188
IPR002182 NB-ARC 190 427
IPR011713 Leu-rich_rpt_3 606 623
No external refs found!